Information for 17-GGTCTGGMMKGTS (Motif 21)

A C T G A C T G A C G T A G T C A C G T A C T G A C T G G T A C G T C A A C G T A C T G A C G T A T G C
Reverse Opposite:
A T C G C G T A G T A C G T C A A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C G T A C
p-value:1e-11
log p-value:-2.547e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 28.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GGTCTGGMMKGTS
GGTCTGGCAT---
 A C T G A C T G A C G T A G T C A C G T A C T G A C T G G T A C G T C A A C G T A C T G A C G T A T G C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTCTGGMMKGTS
CTGTCTGG------
 A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G G T A C G T C A A C G T A C T G A C G T A T G C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GGTCTGGMMKGTS
NNTNNTGTCTGGNNTNG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G G T A C G T C A A C G T A C T G A C G T A T G C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGTCTGGMMKGTS
VBSYGTCTGG------
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G G T A C G T C A A C G T A C T G A C G T A T G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGTCTGGMMKGTS
--CCWGGAATGY-
 A C T G A C T G A C G T A G T C A C G T A C T G A C T G G T A C G T C A A C G T A C T G A C G T A T G C
A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTCTGGMMKGTS
TWGTCTGV------
 A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G G T A C G T C A A C G T A C T G A C G T A T G C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGTCTGGMMKGTS
TGGGTGTGGC-----
 A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G G T A C G T C A A C G T A C T G A C G T A T G C
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGTCTGGMMKGTS
----TGGAATGT-
 A C T G A C T G A C G T A G T C A C G T A C T G A C T G G T A C G T C A A C G T A C T G A C G T A T G C
A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGTCTGGMMKGTS
NTGGGTGTGGCC----
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G G T A C G T C A A C G T A C T G A C G T A T G C
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTCTGGMMKGTS
TGTCTGDCACCT-
 A C T G A C T G A C G T A G T C A C G T A C T G A C T G G T A C G T C A A C G T A C T G A C G T A T G C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T