Information for 13-TGCCCCHGGGGCAAAC (Motif 19)

C G A T C T A G A T G C G T A C G A T C G A T C G T A C C T A G C T A G C T A G T C A G T G A C G T C A T C G A C T G A T A G C
Reverse Opposite:
A T C G G A C T A G C T C A G T A C T G A G T C G A T C G A T C G A T C C A T G C T A G C T A G C A T G T A C G G A T C G C T A
p-value:1e-11
log p-value:-2.610e+01
Information Content per bp:1.513
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif11.14%
Number of Background Sequences with motif2218.0
Percentage of Background Sequences with motif4.84%
Average Position of motif in Targets52.6 +/- 24.4bp
Average Position of motif in Background49.5 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGCCCCHGGGGCAAAC
TGCCCTNAGGGCA---
 C G A T C T A G A T G C G T A C G A T C G A T C G T A C C T A G C T A G C T A G T C A G T G A C G T C A T C G A C T G A T A G C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGCCCCHGGGGCAAAC
TGCCCNNAGGGCA---
 C G A T C T A G A T G C G T A C G A T C G A T C G T A C C T A G C T A G C T A G T C A G T G A C G T C A T C G A C T G A T A G C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGCCCCHGGGGCAAAC
TGCCCTGAGGGCA---
 C G A T C T A G A T G C G T A C G A T C G A T C G T A C C T A G C T A G C T A G T C A G T G A C G T C A T C G A C T G A T A G C
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGCCCCHGGGGCAAAC
TTGCCCTAGGGCAT--
 C G A T C T A G A T G C G T A C G A T C G A T C G T A C C T A G C T A G C T A G T C A G T G A C G T C A T C G A C T G A T A G C
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCCCCHGGGGCAAAC
-TGCCCCAGGGCA---
 C G A T C T A G A T G C G T A C G A T C G A T C G T A C C T A G C T A G C T A G T C A G T G A C G T C A T C G A C T G A T A G C
A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCCCCHGGGGCAAAC
-TGCCCCAGGGCA---
 C G A T C T A G A T G C G T A C G A T C G A T C G T A C C T A G C T A G C T A G T C A G T G A C G T C A T C G A C T G A T A G C
A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGCCCCHGGGGCAAAC
--GCCTCAGGGCAT--
 C G A T C T A G A T G C G T A C G A T C G A T C G T A C C T A G C T A G C T A G T C A G T G A C G T C A T C G A C T G A T A G C
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCCCCHGGGGCAAAC
GTCCCCAGGGGA----
 C G A T C T A G A T G C G T A C G A T C G A T C G T A C C T A G C T A G C T A G T C A G T G A C G T C A T C G A C T G A T A G C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCCCCHGGGGCAAAC
-TGCCCCCGGGCA---
 C G A T C T A G A T G C G T A C G A T C G A T C G T A C C T A G C T A G C T A G T C A G T G A C G T C A T C G A C T G A T A G C
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGCCCCHGGGGCAAAC
--SCCTSAGGSCAW--
 C G A T C T A G A T G C G T A C G A T C G A T C G T A C C T A G C T A G C T A G T C A G T G A C G T C A T C G A C T G A T A G C
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T