Information for 15-CATTTGAHCTAAT (Motif 18)

A G T C C G T A A G C T C G A T A C G T A C T G C G T A G A C T A G T C A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A C G A T C G A T C G T A C T A G C T G A A C G T A G T C C G T A C G T A C T G A A C G T A C T G
p-value:1e-11
log p-value:-2.627e+01
Information Content per bp:1.848
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.7 +/- 18.4bp
Average Position of motif in Background61.5 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CATTTGAHCTAAT----
---TTGACCTANTTATN
 A G T C C G T A A G C T C G A T A C G T A C T G C G T A G A C T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CATTTGAHCTAAT
GCCACGTGACC----
 A C G T A C G T A G T C C G T A A G C T C G A T A C G T A C T G C G T A G A C T A G T C A C G T C G T A C G T A A C G T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CATTTGAHCTAAT-
----TGACCTARTT
 A G T C C G T A A G C T C G A T A C G T A C T G C G T A G A C T A G T C A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CATTTGAHCTAAT
CCTTTGAWGT---
 A G T C C G T A A G C T C G A T A C G T A C T G C G T A G A C T A G T C A C G T C G T A C G T A A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATTTGAHCTAAT
GTCATGTGACC----
 A C G T A C G T A G T C C G T A A G C T C G A T A C G T A C T G C G T A G A C T A G T C A C G T C G T A C G T A A C G T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CATTTGAHCTAAT---
---CTAATTTAATCAA
 A G T C C G T A A G C T C G A T A C G T A C T G C G T A G A C T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CATTTGAHCTAAT
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A G T C C G T A A G C T C G A T A C G T A C T G C G T A G A C T A G T C A C G T C G T A C G T A A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CATTTGAHCTAAT
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T A G T C C G T A A G C T C G A T A C G T A C T G C G T A G A C T A G T C A C G T C G T A C G T A A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CATTTGAHCTAAT
TAAGCCACTTGAAATT--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G C T C G A T A C G T A C T G C G T A G A C T A G T C A C G T C G T A C G T A A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CATTTGAHCTAAT
TNCCTTTGATGT---
 A C G T A C G T A G T C C G T A A G C T C G A T A C G T A C T G C G T A G A C T A G T C A C G T C G T A C G T A A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T