Information for 13-GAGAACAAATACA (Motif 17)

A C T G C G T A C T A G G T C A C G T A A G T C C G T A C G T A C G T A C G A T C G T A A T G C C G T A
Reverse Opposite:
A C G T A T C G A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C G T A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.725e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 28.4bp
Average Position of motif in Background70.3 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GAGAACAAATACA
NTTNAGAACAATTA--
 A C G T A C G T A C G T A C T G C G T A C T A G G T C A C G T A A G T C C G T A C G T A C G T A C G A T C G T A A T G C C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GAGAACAAATACA-
NNNTAACAATTATAN
 A C G T A C T G C G T A C T A G G T C A C G T A A G T C C G T A C G T A C G T A C G A T C G T A A T G C C G T A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAGAACAAATACA--
AGAAGAACAAAGGACTA
 A C G T A C G T A C T G C G T A C T A G G T C A C G T A A G T C C G T A C G T A C G T A C G A T C G T A A T G C C G T A A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGAACAAATACA--
ATAAGAACAAAGGACTA
 A C G T A C G T A C T G C G T A C T A G G T C A C G T A A G T C C G T A C G T A C G T A C G A T C G T A A T G C C G T A A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAGAACAAATACA-
TTTAGAACAATAAAAT
 A C G T A C G T A C T G C G T A C T A G G T C A C G T A A G T C C G T A C G T A C G T A C G A T C G T A A T G C C G T A A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGAACAAATACA
-GGAACAAAGR--
 A C T G C G T A C T A G G T C A C G T A A G T C C G T A C G T A C G T A C G A T C G T A A T G C C G T A
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGAACAAATACA
-AAAACAAAGG--
 A C T G C G T A C T A G G T C A C G T A A G T C C G T A C G T A C G T A C G A T C G T A A T G C C G T A
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGAACAAATACA
-RNAACAATGG--
 A C T G C G T A C T A G G T C A C G T A A G T C C G T A C G T A C G T A C G A T C G T A A T G C C G T A
A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGAACAAATACA
---AACAAT----
 A C T G C G T A C T A G G T C A C G T A A G T C C G T A C G T A C G T A C G A T C G T A A T G C C G T A
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAGAACAAATACA
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C T G C G T A C T A G G T C A C G T A A G T C C G T A C G T A C G T A C G A T C G T A A T G C C G T A
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A