Information for 10-CCATAAAGTCAAAGTG (Motif 13)

A G T C A G T C G T C A A C G T C G T A G T C A C T G A C T A G C A G T A T G C G T C A G T C A C T G A A T C G A C G T A C T G
Reverse Opposite:
T A G C C G T A A T G C A G C T A C G T A C G T A T C G G T C A G A T C A G C T C A G T C G A T G T C A A C G T A C T G T A C G
p-value:1e-13
log p-value:-3.140e+01
Information Content per bp:1.751
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.3 +/- 23.3bp
Average Position of motif in Background57.0 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCATAAAGTCAAAGTG-
--AGAAAGTGAAAGTGA
 A G T C A G T C G T C A A C G T C G T A G T C A C T G A C T A G C A G T A T G C G T C A G T C A C T G A A T C G A C G T A C T G A C G T
A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCATAAAGTCAAAGTG
---GAAAGTGAAAGT-
 A G T C A G T C G T C A A C G T C G T A G T C A C T G A C T A G C A G T A T G C G T C A G T C A C T G A A T C G A C G T A C T G
A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCATAAAGTCAAAGTG
---AAAAGTCAA----
 A G T C A G T C G T C A A C G T C G T A G T C A C T G A C T A G C A G T A T G C G T C A G T C A C T G A A T C G A C G T A C T G
A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCATAAAGTCAAAGTG
---GAAAGTGAAAGT-
 A G T C A G T C G T C A A C G T C G T A G T C A C T G A C T A G C A G T A T G C G T C A G T C A C T G A A T C G A C G T A C T G
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCATAAAGTCAAAGTG
ACGGCCATAAAATTAAT---
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A C G T C G T A G T C A C T G A C T A G C A G T A T G C G T C A G T C A C T G A A T C G A C G T A C T G
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCATAAAGTCAAAGTG
-ACGAAAGCGAAAGT-
 A G T C A G T C G T C A A C G T C G T A G T C A C T G A C T A G C A G T A T G C G T C A G T C A C T G A A T C G A C G T A C T G
A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCATAAAGTCAAAGTG
---GAAASYGAAASY-
 A G T C A G T C G T C A A C G T C G T A G T C A C T G A C T A G C A G T A T G C G T C A G T C A C T G A A T C G A C G T A C T G
A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCATAAAGTCAAAGTG
AAGCCATAAAA--------
 A C G T A C G T A C G T A G T C A G T C G T C A A C G T C G T A G T C A C T G A C T A G C A G T A T G C G T C A G T C A C T G A A T C G A C G T A C T G
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCATAAAGTCAAAGTG
NGYCATAAAWCH------
 A C G T A C G T A G T C A G T C G T C A A C G T C G T A G T C A C T G A C T A G C A G T A T G C G T C A G T C A C T G A A T C G A C G T A C T G
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCATAAAGTCAAAGTG
---GAAACTGAAACT-
 A G T C A G T C G T C A A C G T C G T A G T C A C T G A C T A G C A G T A T G C G T C A G T C A C T G A A T C G A C G T A C T G
A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T