Information for 7-AYTSTCYTGRWST (Motif 6)

C T G A A G T C A G C T A T G C A C G T A G T C A G C T A C G T A C T G T C A G C G T A T A C G A C G T
Reverse Opposite:
C G T A A T G C C G A T A G T C G T A C G T C A T C G A T C A G G T C A A T C G T C G A C T A G A G C T
p-value:1e-14
log p-value:-3.438e+01
Information Content per bp:1.684
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets35.8 +/- 16.6bp
Average Position of motif in Background33.2 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AYTSTCYTGRWST-
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T C T G A A G T C A G C T A T G C A C G T A G T C A G C T A C G T A C T G T C A G C G T A T A C G A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AYTSTCYTGRWST
AAAATTGTTATGAA--
 A C G T A C G T A C G T C T G A A G T C A G C T A T G C A C G T A G T C A G C T A C G T A C T G T C A G C G T A T A C G A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AYTSTCYTGRWST
CTCATTGTC-------
 A C G T A C G T A C G T C T G A A G T C A G C T A T G C A C G T A G T C A G C T A C G T A C T G T C A G C G T A T A C G A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AYTSTCYTGRWST
TAATTGTTCTAAAC-
 A C G T A C G T C T G A A G T C A G C T A T G C A C G T A G T C A G C T A C G T A C T G T C A G C G T A T A C G A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AYTSTCYTGRWST
CCATTGTTTT-----
 A C G T A C G T C T G A A G T C A G C T A T G C A C G T A G T C A G C T A C G T A C T G T C A G C G T A T A C G A C G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------AYTSTCYTGRWST
GTATCTATTGTTCTTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A G C T A T G C A C G T A G T C A G C T A C G T A C T G T C A G C G T A T A C G A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AYTSTCYTGRWST
NNAATTCTCGNTNAN-
 A C G T A C G T A C G T C T G A A G T C A G C T A T G C A C G T A G T C A G C T A C G T A C T G T C A G C G T A T A C G A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AYTSTCYTGRWST
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T C T G A A G T C A G C T A T G C A C G T A G T C A G C T A C G T A C T G T C A G C G T A T A C G A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----AYTSTCYTGRWST
AANTTATTGTTCTNNA--
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C A G C T A T G C A C G T A G T C A G C T A C G T A C T G T C A G C G T A T A C G A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:10
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------AYTSTCYTGRWST
GGAAAAATTGTTAGGAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A G C T A T G C A C G T A G T C A G C T A C G T A C T G T C A G C G T A T A C G A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A A C G T A C G T