Information for 24-CGTTAATGTA (Motif 33)

A G T C C T A G A G C T C A G T G T C A T C G A G C A T A C T G C G A T G T C A
Reverse Opposite:
A C G T C G T A G T A C C G T A A C G T A C G T G C T A C T G A G A T C T C A G
p-value:1e-6
log p-value:-1.387e+01
Information Content per bp:1.696
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets62.8 +/- 23.2bp
Average Position of motif in Background38.9 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CGTTAATGTA
-GKTAATGR-
 A G T C C T A G A G C T C A G T G T C A T C G A G C A T A C T G C G A T G T C A
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGTTAATGTA
CACTAATT--
 A G T C C T A G A G C T C A G T G T C A T C G A G C A T A C T G C G A T G T C A
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGTTAATGTA
-TTTAAT---
 A G T C C T A G A G C T C A G T G T C A T C G A G C A T A C T G C G A T G T C A
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGTTAATGTA
--TTAATTAN
 A G T C C T A G A G C T C A G T G T C A T C G A G C A T A C T G C G A T G T C A
A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

HOXB3/MA0903.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGTTAATGTA-
-NNTAATTANN
 A G T C C T A G A G C T C A G T G T C A T C G A G C A T A C T G C G A T G T C A A C G T
A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

GSX2/MA0893.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGTTAATGTA-
-NTTAATTAGN
 A G T C C T A G A G C T C A G T G T C A T C G A G C A T A C T G C G A T G T C A A C G T
A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

NOTO/MA0710.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGTTAATGTA-
-NNTAATTAGN
 A G T C C T A G A G C T C A G T G T C A T C G A G C A T A C T G C G A T G T C A A C G T
A C G T T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGTTAATGTA
--TTAATTAN
 A G T C C T A G A G C T C A G T G T C A T C G A G C A T A C T G C G A T G T C A
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CGTTAATGTA
NNTNTCATGAATGT-
 A C G T A C G T A C G T A C G T A C G T A G T C C T A G A G C T C A G T G T C A T C G A G C A T A C T G C G A T G T C A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

PH0173.1_Uncx/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGTTAATGTA-----
CNCNTTAATTAATTANN
 A C G T A C G T A G T C C T A G A G C T C A G T G T C A T C G A G C A T A C T G C G A T G T C A A C G T A C G T A C G T A C G T A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G