Information for 3-GCARCAGGGCAGAGGG (Motif 16)

A C T G A T G C C T G A T C A G T G A C C T G A C T A G A C T G A T C G A T G C G C T A A C T G C T G A C T A G T A C G T A C G
Reverse Opposite:
A T G C A G T C A G T C G A C T T A G C C G A T T A C G A T G C A G T C A G T C G A C T A C T G A G T C G A C T T A C G T G A C
p-value:1e-11
log p-value:-2.567e+01
Information Content per bp:1.669
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.9 +/- 29.3bp
Average Position of motif in Background62.7 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCARCAGGGCAGAGGG--
----TAGGGCAAAGGTCA
 A C T G A T G C C T G A T C A G T G A C C T G A C T A G A C T G A T C G A T G C G C T A A C T G C T G A C T A G T A C G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCARCAGGGCAGAGGG--
---GTAGGGCAAAGGTCA
 A C T G A T G C C T G A T C A G T G A C C T G A C T A G A C T G A T C G A T G C G C T A A C T G C T G A C T A G T A C G T A C G A C G T A C G T
A C G T A C G T A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCARCAGGGCAGAGGG
-WDNCTGGGCA-----
 A C T G A T G C C T G A T C A G T G A C C T G A C T A G A C T G A T C G A T G C G C T A A C T G C T G A C T A G T A C G T A C G
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCARCAGGGCAGAGGG--
---AGGGGTCAGAGGTCA
 A C T G A T G C C T G A T C A G T G A C C T G A C T A G A C T G A T C G A T G C G C T A A C T G C T G A C T A G T A C G T A C G A C G T A C G T
A C G T A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCARCAGGGCAGAGGG
GCCTCAGGGCAT----
 A C T G A T G C C T G A T C A G T G A C C T G A C T A G A C T G A T C G A T G C G C T A A C T G C T G A C T A G T A C G T A C G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCARCAGGGCAGAGGG
---TNNGGGCAG----
 A C T G A T G C C T G A T C A G T G A C C T G A C T A G A C T G A T C G A T G C G C T A A C T G C T G A C T A G T A C G T A C G
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCARCAGGGCAGAGGG
TCACCTCTGGGCAG----
 A C G T A C G T A C T G A T G C C T G A T C A G T G A C C T G A C T A G A C T G A T C G A T G C G C T A A C T G C T G A C T A G T A C G T A C G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCARCAGGGCAGAGGG--
----TGGGGCAAAGGTCA
 A C T G A T G C C T G A T C A G T G A C C T G A C T A G A C T G A T C G A T G C G C T A A C T G C T G A C T A G T A C G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCARCAGGGCAGAGGG
CCACACAGCAGGAGA-----
 A C G T A C G T A C G T A C G T A C T G A T G C C T G A T C A G T G A C C T G A C T A G A C T G A T C G A T G C G C T A A C T G C T G A C T A G T A C G T A C G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCARCAGGGCAGAGGG--
----GAGGTCAAAGGTCA
 A C T G A T G C C T G A T C A G T G A C C T G A C T A G A C T G A T C G A T G C G C T A A C T G C T G A C T A G T A C G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A