Information for 12-GCATGACAAA (Motif 14)

C A T G T A G C G C T A C A G T T A C G C T G A T G A C G C T A T C G A T C G A
Reverse Opposite:
A G C T A G C T C G A T A C T G G A C T A T G C G T C A C G A T A T C G G T A C
p-value:1e-12
log p-value:-2.940e+01
Information Content per bp:1.445
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets46.1 +/- 31.9bp
Average Position of motif in Background51.7 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GCATGACAAA
--TTGACAG-
 C A T G T A G C G C T A C A G T T A C G C T G A T G A C G C T A T C G A T C G A
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GCATGACAAA
--TTGACAGG
 C A T G T A G C G C T A C A G T T A C G C T G A T G A C G C T A T C G A T C G A
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCATGACAAA
-CATGAC---
 C A T G T A G C G C T A C A G T T A C G C T G A T G A C G C T A T C G A T C G A
A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCATGACAAA-
ATTTGCATAACAAAG
 A C G T A C G T A C G T A C G T C A T G T A G C G C T A C A G T T A C G C T G A T G A C G C T A T C G A T C G A A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCATGACAAA----
ACCGTGACTAATTNN
 A C G T C A T G T A G C G C T A C A G T T A C G C T G A T G A C G C T A T C G A T C G A A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCATGACAAA
--TTGACAGC
 C A T G T A G C G C T A C A G T T A C G C T G A T G A C G C T A T C G A T C G A
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCATGACAAA
-RHTGWCAR-
 C A T G T A G C G C T A C A G T T A C G C T G A T G A C G C T A T C G A T C G A
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCATGACAAA
NCGTGACN--
 C A T G T A G C G C T A C A G T T A C G C T G A T G A C G C T A T C G A T C G A
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GCATGACAAA-
-----ACAAAG
 C A T G T A G C G C T A C A G T T A C G C T G A T G A C G C T A T C G A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCATGACAAA--
--RNAACAATGG
 C A T G T A G C G C T A C A G T T A C G C T G A T G A C G C T A T C G A T C G A A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G