Information for 6-AAGCCCCAGG (Motif 6)

G T C A T G C A T A C G A G T C G T A C G T A C A T G C C T G A T C A G T A C G
Reverse Opposite:
A T G C A G T C G A C T T A C G C A T G C A T G T C A G A T G C A C G T C A G T
p-value:1e-11
log p-value:-2.586e+01
Information Content per bp:1.648
Number of Target Sequences with motif108.0
Percentage of Target Sequences with motif14.01%
Number of Background Sequences with motif3234.4
Percentage of Background Sequences with motif6.97%
Average Position of motif in Targets51.2 +/- 25.8bp
Average Position of motif in Background49.7 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AAGCCCCAGG--
-AGCCTCAGGCA
 G T C A T G C A T A C G A G T C G T A C G T A C A T G C C T G A T C A G T A C G A C G T A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AAGCCCCAGG--
-CGCCTCAGGCA
 G T C A T G C A T A C G A G T C G T A C G T A C A T G C C T G A T C A G T A C G A C G T A C G T
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AAGCCCCAGG--
-AGCCTCAGGCA
 G T C A T G C A T A C G A G T C G T A C G T A C A T G C C T G A T C A G T A C G A C G T A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AAGCCCCAGG----
--GCCTCAGGGCAT
 G T C A T G C A T A C G A G T C G T A C G T A C A T G C C T G A T C A G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCCCAGG----
NTNGCCTCAGGCNNN
 A C G T G T C A T G C A T A C G A G T C G T A C G T A C A T G C C T G A T C A G T A C G A C G T A C G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AAGCCCCAGG----
--SCCTSAGGSCAW
 G T C A T G C A T A C G A G T C G T A C G T A C A T G C C T G A T C A G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCCCAGG----
NTCGCCTCAGGCAAT
 A C G T G T C A T G C A T A C G A G T C G T A C G T A C A T G C C T G A T C A G T A C G A C G T A C G T A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AAGCCCCAGG----
--TCCCCTGGGGAC
 G T C A T G C A T A C G A G T C G T A C G T A C A T G C C T G A T C A G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGCCCCAGG----
ATTCCCTGAGGGGAA
 A C G T G T C A T G C A T A C G A G T C G T A C G T A C A T G C C T G A T C A G T A C G A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAGCCCCAGG---
-TGCCCCAGGGCA
 G T C A T G C A T A C G A G T C G T A C G T A C A T G C C T G A T C A G T A C G A C G T A C G T A C G T
A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A