Information for 11-GCTGACTGGT (Motif 17)

A C T G A T G C A C G T A C T G C G T A A G T C A C G T A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G T A A C T G C G A T A G T C C G T A A T C G A G T C
p-value:1e-6
log p-value:-1.481e+01
Information Content per bp:1.946
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif26.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets41.1 +/- 15.6bp
Average Position of motif in Background47.0 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GCTGACTGGT---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G T A A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCTGACTGGT
TGCTGACTCA-
 A C G T A C T G A T G C A C G T A C T G C G T A A G T C A C G T A C T G A C T G A C G T
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCTGACTGGT
-CTGTCTGG-
 A C T G A T G C A C G T A C T G C G T A A G T C A C G T A C T G A C T G A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCTGACTGGT------
-CTGATTGGTCNATTT
 A C T G A T G C A C G T A C T G C G T A A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Mafb/MA0117.2/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTGACTGGT
AAAATGCTGACT---
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G T A A G T C A C G T A C T G A C T G A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCTGACTGGT----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G T A A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCTGACTGGT
AATTTGCTGAC----
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G T A A G T C A C G T A C T G A C T G A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCTGACTGGT
VBSYGTCTGG-
 A C G T A C T G A T G C A C G T A C T G C G T A A G T C A C G T A C T G A C T G A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:9
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------GCTGACTGGT
TAAAAATGCTGACTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G T A A G T C A C G T A C T G A C T G A C G T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTGACTGGT----
--TGATTGGCTANN
 A C T G A T G C A C G T A C T G C G T A A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T