Information for 3-AGAGCAAATHYTGCAR (Motif 5)

C G T A C T A G C G T A C A T G A G T C G C T A T C G A C G T A C G A T G T C A A G T C C G A T C T A G G A T C C G T A C T G A
Reverse Opposite:
A G C T A C G T C A T G A G T C G C T A C T A G C A G T G C T A C G A T A G C T C G A T A C T G G T A C C G A T A G T C A C G T
p-value:1e-13
log p-value:-3.143e+01
Information Content per bp:1.709
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.5 +/- 24.4bp
Average Position of motif in Background31.4 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf7/MA0769.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGAGCAAATHYTGCAR
AAAGATCAAAGG------
 A C G T A C G T C G T A C T A G C G T A C A T G A G T C G C T A T C G A C G T A C G A T G T C A A G T C C G A T C T A G G A T C C G T A C T G A
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGAGCAAATHYTGCAR
AAAGATCAAAGGGTT---
 A C G T A C G T C G T A C T A G C G T A C A T G A G T C G C T A T C G A C G T A C G A T G T C A A G T C C G A T C T A G G A T C C G T A C T G A
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGAGCAAATHYTGCAR--
AADGAGVCANYASTACAGNC
 A C G T A C G T C G T A C T A G C G T A C A T G A G T C G C T A T C G A C G T A C G A T G T C A A G T C C G A T C T A G G A T C C G T A C T G A A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGAGCAAATHYTGCAR
NTTNAGAACAATTA------
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C A T G A G T C G C T A T C G A C G T A C G A T G T C A A G T C C G A T C T A G G A T C C G T A C T G A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGAGCAAATHYTGCAR--
---GAAAAAATTGCAAGG
 C G T A C T A G C G T A C A T G A G T C G C T A T C G A C G T A C G A T G T C A A G T C C G A T C T A G G A T C C G T A C T G A A C G T A C G T
A C G T A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGAGCAAATHYTGCAR
NANAGATCAAAGGGNNN--
 A C G T A C G T A C G T C G T A C T A G C G T A C A T G A G T C G C T A T C G A C G T A C G A T G T C A A G T C C G A T C T A G G A T C C G T A C T G A
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGAGCAAATHYTGCAR
TTAAGAACAATAAATT---
 A C G T A C G T A C G T C G T A C T A G C G T A C A T G A G T C G C T A T C G A C G T A C G A T G T C A A G T C C G A T C T A G G A T C C G T A C T G A
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGAGCAAATHYTGCAR
NNNAGATCAAAGGANNN--
 A C G T A C G T A C G T C G T A C T A G C G T A C A T G A G T C G C T A T C G A C G T A C G A T G T C A A G T C C G A T C T A G G A T C C G T A C T G A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAGCAAATHYTGCAR
ACATCAAAGGNA----
 C G T A C T A G C G T A C A T G A G T C G C T A T C G A C G T A C G A T G T C A A G T C C G A T C T A G G A T C C G T A C T G A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGAGCAAATHYTGCAR
TTTAGAACAATAAAAT---
 A C G T A C G T A C G T C G T A C T A G C G T A C A T G A G T C G C T A T C G A C G T A C G A T G T C A A G T C C G A T C T A G G A T C C G T A C T G A
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T A C G T A C G T A C G T