Information for 5-RTRAMKTCAKTGGWAA (Motif 7)

C T A G A C G T T C A G C G T A G T C A A C T G A C G T A G T C C G T A A C T G A C G T C T A G A C T G C G A T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A G T C C G T A G T A C A C G T A C T G C G T A T G A C A C G T A C G T A G T C C G T A G A T C
p-value:1e-11
log p-value:-2.706e+01
Information Content per bp:1.845
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.4 +/- 21.3bp
Average Position of motif in Background40.9 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RTRAMKTCAKTGGWAA
ATGACGTCAYYN----
 C T A G A C G T T C A G C G T A G T C A A C T G A C G T A G T C C G T A A C T G A C G T C T A G A C T G C G A T C G T A C G T A
T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G A C G T A C G T A C G T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:RTRAMKTCAKTGGWAA
RTGACGTCAYCN----
 C T A G A C G T T C A G C G T A G T C A A C T G A C G T A G T C C G T A A C T G A C G T C T A G A C T G C G A T C G T A C G T A
T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G A C G T A C G T A C G T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---RTRAMKTCAKTGGWAA
ACGATGACGTCATCGA---
 A C G T A C G T A C G T C T A G A C G T T C A G C G T A G T C A A C T G A C G T A G T C C G T A A C T G A C G T C T A G A C T G C G A T C G T A C G T A
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A A C G T A C G T A C G T

Creb5/MA0840.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RTRAMKTCAKTGGWAA
NGTGACGTCATN-----
 A C G T C T A G A C G T T C A G C G T A G T C A A C T G A C G T A G T C C G T A A C T G A C G T C T A G A C T G C G A T C G T A C G T A
C T A G T C A G C G A T C A T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0038.1_Jundm2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---RTRAMKTCAKTGGWAA
NCGATGACGTCATCGN---
 A C G T A C G T A C G T C T A G A C G T T C A G C G T A G T C A A C T G A C G T A G T C C G T A A C T G A C G T C T A G A C T G C G A T C G T A C G T A
C T G A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T T G A C T A C G T A C G A C G T A C G T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--RTRAMKTCAKTGGWAA
NGATGACGTCAT------
 A C G T A C G T C T A G A C G T T C A G C G T A G T C A A C T G A C G T A G T C C G T A A C T G A C G T C T A G A C T G C G A T C G T A C G T A
A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ATF7/MA0834.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--RTRAMKTCAKTGGWAA
NGATGACGTCATNN----
 A C G T A C G T C T A G A C G T T C A G C G T A G T C A A C T G A C G T A G T C C G T A A C T G A C G T C T A G A C T G C G A T C G T A C G T A
A G T C C A T G T C G A G A C T A C T G G T C A A G T C T C A G G A C T G T A C G T C A A G C T G A T C T C A G A C G T A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--RTRAMKTCAKTGGWAA
NGATGACGTCAT------
 A C G T A C G T C T A G A C G T T C A G C G T A G T C A A C T G A C G T A G T C C G T A A C T G A C G T C T A G A C T G C G A T C G T A C G T A
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:RTRAMKTCAKTGGWAA--
--------AATGGAAAAT
 C T A G A C G T T C A G C G T A G T C A A C T G A C G T A G T C C G T A A C T G A C G T C T A G A C T G C G A T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RTRAMKTCAKTGGWAA
GATGACGTCATC-----
 A C G T C T A G A C G T T C A G C G T A G T C A A C T G A C G T A G T C C G T A A C T G A C G T C T A G A C T G C G A T C G T A C G T A
A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C A C G T A C G T A C G T A C G T A C G T