p-value: | 1e-9 |
log p-value: | -2.186e+01 |
Information Content per bp: | 1.786 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.77% |
Number of Background Sequences with motif | 2.2 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.2 +/- 21.2bp |
Average Position of motif in Background | 45.6 +/- 20.0bp |
Strand Bias (log2 ratio + to - strand density) | -2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer
Match Rank: | 1 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TVTCTTTBCTATAGGA TNCCTTTGATGT---- |
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SA0001.1_at_AC_acceptor/Jaspar
Match Rank: | 2 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TVTCTTTBCTATAGGA- TTTTTTTTTTTTTTCAGGTT |
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SA0002.1_at_AC_acceptor/Jaspar
Match Rank: | 3 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TVTCTTTBCTATAGGA- TTTTTTTTTTTTTTCAGGTT |
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PB0021.1_Gata3_1/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TVTCTTTBCTATAGGA- NNTNANTTCTTATCTCTANANN |
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Mecom/MA0029.1/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TVTCTTTBCTATAGGA TNTTATCTTATCTT----- |
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Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TVTCTTTBCTATAGGA --CCTTTGATGT---- |
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PB0181.1_Spdef_2/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TVTCTTTBCTATAGGA------- -------CTACTAGGATGTNNTN |
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PB0106.1_Arid5a_2/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TVTCTTTBCTATAGGA----- ----CATACAATACGAAATAA |
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PB0082.1_Tcf3_1/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TVTCTTTBCTATAGGA NNTTCCTTTGATCTANA- |
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PB0083.1_Tcf7_1/Jaspar
Match Rank: | 10 |
Score: | 0.50 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TVTCTTTBCTATAGGA NNTTCCTTTGATCTNNA- |
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