Information for 14-YARAATTTRKGAT (Motif 23)

A G T C C G T A C T A G C G T A C T G A A C G T G A C T A C G T C T A G A C G T A C T G T C G A A C G T
Reverse Opposite:
C G T A A G C T A G T C G T C A A G T C G T C A C T G A G T C A A G C T G C A T A G T C C G A T T C A G
p-value:1e-9
log p-value:-2.193e+01
Information Content per bp:1.688
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.98%
Number of Background Sequences with motif341.6
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets51.7 +/- 21.6bp
Average Position of motif in Background48.3 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:YARAATTTRKGAT--
-----GCTGTGGTTT
 A G T C C G T A C T A G C G T A C T G A A C G T G A C T A C G T C T A G A C G T A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:YARAATTTRKGAT---
----NNHTGTGGTTWN
 A G T C C G T A C T A G C G T A C T G A A C G T G A C T A C G T C T A G A C G T A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:YARAATTTRKGAT---
------CTGTGGTTTN
 A G T C C G T A C T A G C G T A C T G A A C G T G A C T A C G T C T A G A C G T A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:YARAATTTRKGAT--
-----NNTGTGGTTT
 A G T C C G T A C T A G C G T A C T G A A C G T G A C T A C G T C T A G A C G T A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:YARAATTTRKGAT------
--TATTATGGGATGGATAA
 A G T C C G T A C T A G C G T A C T G A A C G T G A C T A C G T C T A G A C G T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:YARAATTTRKGAT--
-----TTTGCGGTTT
 A G T C C G T A C T A G C G T A C T G A A C G T G A C T A C G T C T A G A C G T A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:YARAATTTRKGAT--
----GTCTGTGGTTT
 A G T C C G T A C T A G C G T A C T G A A C G T G A C T A C G T C T A G A C G T A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

HOXA5/MA0158.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:YARAATTTRKGAT
---AATTAGTG--
 A G T C C G T A C T A G C G T A C T G A A C G T G A C T A C G T C T A G A C G T A C T G T C G A A C G T
A C G T A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:YARAATTTRKGAT--
----TGCTGTGATTT
 A G T C C G T A C T A G C G T A C T G A A C G T G A C T A C G T C T A G A C G T A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:YARAATTTRKGAT---
------CNGTGATTTN
 A G T C C G T A C T A G C G T A C T G A A C G T G A C T A C G T C T A G A C G T A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G