Information for 12-AACTTGTTHTTCACAB (Motif 20)

C T G A C G T A A G T C G C A T A C G T A C T G G A C T A C G T G A C T A G C T A C G T G T A C C G T A A T G C C G T A A C G T
Reverse Opposite:
T C G A C G A T T A C G G A C T A C T G T C G A C T G A C T A G G T C A C G T A G T A C C G T A C G T A C T A G C G A T A G C T
p-value:1e-10
log p-value:-2.324e+01
Information Content per bp:1.702
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif62.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets51.2 +/- 28.5bp
Average Position of motif in Background48.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AACTTGTTHTTCACAB
NNNNTTTTTTTTTNAAC
 A C G T C T G A C G T A A G T C G C A T A C G T A C T G G A C T A C G T G A C T A G C T A C G T G T A C C G T A A T G C C G T A A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AACTTGTTHTTCACAB
NTNTTGTTGTTTGTN-
 C T G A C G T A A G T C G C A T A C G T A C T G G A C T A C G T G A C T A G C T A C G T G T A C C G T A A T G C C G T A A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AACTTGTTHTTCACAB
NAAACCGGTTTT------
 A C G T A C G T C T G A C G T A A G T C G C A T A C G T A C T G G A C T A C G T G A C T A G C T A C G T G T A C C G T A A T G C C G T A A C G T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AACTTGTTHTTCACAB
NCNTTTGTTATTTNN--
 A C G T C T G A C G T A A G T C G C A T A C G T A C T G G A C T A C G T G A C T A G C T A C G T G T A C C G T A A T G C C G T A A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AACTTGTTHTTCACAB
AANTTATTGTTCTNNA---
 A C G T A C G T A C G T C T G A C G T A A G T C G C A T A C G T A C T G G A C T A C G T G A C T A G C T A C G T G T A C C G T A A T G C C G T A A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AACTTGTTHTTCACAB
AAGAACATWHTGTTC----
 A C G T A C G T A C G T C T G A C G T A A G T C G C A T A C G T A C T G G A C T A C G T G A C T A G C T A C G T G T A C C G T A A T G C C G T A A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AACTTGTTHTTCACAB
TAATTGTTCTAAAC--
 C T G A C G T A A G T C G C A T A C G T A C T G G A C T A C G T G A C T A G C T A C G T G T A C C G T A A T G C C G T A A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AACTTGTTHTTCACAB
-CTTTGTTATGCAAAT
 C T G A C G T A A G T C G C A T A C G T A C T G G A C T A C G T G A C T A G C T A C G T G T A C C G T A A T G C C G T A A C G T
A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AACTTGTTHTTCACAB
-CATTGTTATGCAAAT
 C T G A C G T A A G T C G C A T A C G T A C T G G A C T A C G T G A C T A G C T A C G T G T A C C G T A A T G C C G T A A C G T
A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AACTTGTTHTTCACAB------
-----NNTTTTCACACCTTNNN
 C T G A C G T A A G T C G C A T A C G T A C T G G A C T A C G T G A C T A G C T A C G T G T A C C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C