Information for 9-GRRWKKAAMATGAGCC (Motif 15)

A C T G C T G A C T G A C G T A A C G T A C G T C G T A C G T A T G A C C G T A A C G T C T A G C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T G T C A G T C A G C A T A G C T A G C T G T A C
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.6 +/- 15.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GRRWKKAAMATGAGCC
----GWAAYHTGABMC
 A C T G C T G A C T G A C G T A A C G T A C G T C G T A C G T A T G A C C G T A A C G T C T A G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GRRWKKAAMATGAGCC
----GWAAYHTGAKMC
 A C T G C T G A C T G A C G T A A C G T A C G T C G T A C G T A T G A C C G T A A C G T C T A G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.58
Offset:9
Orientation:forward strand
Alignment:GRRWKKAAMATGAGCC-
---------ATAATCCC
 A C T G C T G A C T G A C G T A A C G T A C G T C G T A C G T A T G A C C G T A A C G T C T A G C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GRRWKKAAMATGAGCC---
--AAACATAATGAGGTTGC
 A C T G C T G A C T G A C G T A A C G T A C G T C G T A C G T A T G A C C G T A A C G T C T A G C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GRRWKKAAMATGAGCC---
--GACGATAATGAGCTTGC
 A C T G C T G A C T G A C G T A A C G T A C G T C G T A C G T A T G A C C G T A A C G T C T A G C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.53
Offset:11
Orientation:forward strand
Alignment:GRRWKKAAMATGAGCC
-----------CAGCC
 A C T G C T G A C T G A C G T A A C G T A C G T C G T A C G T A T G A C C G T A A C G T C T A G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GRRWKKAAMATGAGCC
------NTAATGAGCT
 A C T G C T G A C T G A C G T A A C G T A C G T C G T A C G T A T G A C C G T A A C G T C T A G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

BATF::JUN/MA0462.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GRRWKKAAMATGAGCC-
------GAAATGACTCA
 A C T G C T G A C T G A C G T A A C G T A C G T C G T A C G T A T G A C C G T A A C G T C T A G C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A

JDP2/MA0655.1/Jaspar

Match Rank:9
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GRRWKKAAMATGAGCC--
---------ATGAGTCAT
 A C T G C T G A C T G A C G T A A C G T A C G T C G T A C G T A T G A C C G T A A C G T C T A G C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T

JUND/MA0491.1/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GRRWKKAAMATGAGCC---
--------NATGAGTCACN
 A C T G C T G A C T G A C G T A A C G T A C G T C G T A C G T A T G A C C G T A A C G T C T A G C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C