Information for 7-GTTTGCCCTCAATCAG (Motif 13)

T C A G C G A T C G A T A C G T T C A G A G T C G T A C A G T C A C G T A G T C C G T A G T C A A C G T G T A C C G T A A C T G
Reverse Opposite:
T A G C A C G T C A T G T C G A A C G T G C A T A C T G C G T A C T A G A C T G A C T G A G T C C G T A C G T A C G T A A G T C
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.721
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.6 +/- 18.4bp
Average Position of motif in Background59.6 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTTTGCCCTCAATCAG
--CTGCCCGCA-----
 T C A G C G A T C G A T A C G T T C A G A G T C G T A C A G T C A C G T A G T C C G T A G T C A A C G T G T A C C G T A A C T G
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTTTGCCCTCAATCAG
----GCCATAAATCA-
 T C A G C G A T C G A T A C G T T C A G A G T C G T A C A G T C A C G T A G T C C G T A G T C A A C G T G T A C C G T A A C T G
A C G T A C G T A C G T A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTTTGCCCTCAATCAG
---TGACCTYA-----
 T C A G C G A T C G A T A C G T T C A G A G T C G T A C A G T C A C G T A G T C C G T A G T C A A C G T G T A C C G T A A C T G
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTTTGCCCTCAATCAG
---GGCCATAAATCA-
 T C A G C G A T C G A T A C G T T C A G A G T C G T A C A G T C A C G T A G T C C G T A G T C A A C G T G T A C C G T A A C T G
A C G T A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTTTGCCCTCAATCAG
GGGTGTGCCCAAAAGG--
 A C G T A C G T T C A G C G A T C G A T A C G T T C A G A G T C G T A C A G T C A C G T A G T C C G T A G T C A A C G T G T A C C G T A A C T G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTTTGCCCTCAATCAG
---RGCCATYAATCA-
 T C A G C G A T C G A T A C G T T C A G A G T C G T A C A G T C A C G T A G T C C G T A G T C A A C G T G T A C C G T A A C T G
A C G T A C G T A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GTTTGCCCTCAATCAG
-----TCATCAATCA-
 T C A G C G A T C G A T A C G T T C A G A G T C G T A C A G T C A C G T A G T C C G T A G T C A A C G T G T A C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTTTGCCCTCAATCAG
---GGCCATAAATCAC
 T C A G C G A T C G A T A C G T T C A G A G T C G T A C A G T C A C G T A G T C C G T A G T C A A C G T G T A C C G T A A C T G
A C G T A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTTTGCCCTCAATCAG
---TGACCTTGAT---
 T C A G C G A T C G A T A C G T T C A G A G T C G T A C A G T C A C G T A G T C C G T A G T C A A C G T G T A C C G T A A C T G
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTTTGCCCTCAATCAG
---NSCACTYVAV---
 T C A G C G A T C G A T A C G T T C A G A G T C G T A C A G T C A C G T A G T C C G T A G T C A A C G T G T A C C G T A A C T G
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T