Information for 3-WGRACAAAYA (Motif 3)

C G A T A T C G C T G A C G T A A T G C C G T A C G T A G T C A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A C G T A C G T A T C G A C G T G A C T A T G C G C T A
p-value:1e-17
log p-value:-4.039e+01
Information Content per bp:1.782
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.88%
Number of Background Sequences with motif358.5
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets48.3 +/- 23.5bp
Average Position of motif in Background48.1 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:WGRACAAAYA
RNAACAATGG
 C G A T A T C G C T G A C G T A A T G C C G T A C G T A G T C A A G T C C G T A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----WGRACAAAYA
NTTNAGAACAATTA
 A C G T A C G T A C G T A C G T C G A T A T C G C T G A C G T A A T G C C G T A C G T A G T C A A G T C C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:WGRACAAAYA
--AACAAT--
 C G A T A T C G C T G A C G T A A T G C C G T A C G T A G T C A A G T C C G T A
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--WGRACAAAYA---
NNNTAACAATTATAN
 A C G T A C G T C G A T A T C G C T G A C G T A A T G C C G T A C G T A G T C A A G T C C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---WGRACAAAYA----
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T C G A T A T C G C T G A C G T A A T G C C G T A C G T A G T C A A G T C C G T A A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:WGRACAAAYA
GGAACAAAGR
 C G A T A T C G C T G A C G T A A T G C C G T A C G T A G T C A A G T C C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---WGRACAAAYA----
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T C G A T A T C G C T G A C G T A A T G C C G T A C G T A G T C A A G T C C G T A A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----WGRACAAAYA--
ATTTACGACAAATAGC
 A C G T A C G T A C G T A C G T C G A T A T C G C T G A C G T A A T G C C G T A C G T A G T C A A G T C C G T A A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:WGRACAAAYA---
-AAACAAACATTC
 C G A T A T C G C T G A C G T A A T G C C G T A C G T A G T C A A G T C C G T A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:WGRACAAAYA
-AAATAAACA
 C G A T A T C G C T G A C G T A A T G C C G T A C G T A G T C A A G T C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A