Information for 6-CTCCCATTGTATACAC (Motif 17)

G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C T G A C G T C G T A A C G T C G T A A G T C C G T A A T G C
Reverse Opposite:
A T C G C G A T A C T G A C G T G T C A C G A T C G T A A G T C C G T A G T C A G C A T A C T G A C T G A C T G C G T A A C T G
p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.883
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.4 +/- 19.5bp
Average Position of motif in Background43.0 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CTCCCATTGTATACAC
TGTTCCCATTGTGTACT-
 A C G T A C G T G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C T G A C G T C G T A A C G T C G T A A G T C C G T A A T G C
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTCCCATTGTATACAC--
---CCATTGTATGCAAAT
 G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C T G A C G T C G T A A C G T C G T A A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCCCATTGTATACAC
NNNCCATTGTGTNAN-
 G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C T G A C G T C G T A A C G T C G T A A G T C C G T A A T G C
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTCCCATTGTATACAC
---CCTTTGTT-----
 G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C T G A C G T C G T A A C G T C G T A A G T C C G T A A T G C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTCCCATTGTATACAC
--NCCATTGTTC----
 G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C T G A C G T C G T A A C G T C G T A A G T C C G T A A T G C
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCCCATTGTATACAC
--NCCATTGTTY----
 G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C T G A C G T C G T A A C G T C G T A A G T C C G T A A T G C
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTCCCATTGTATACAC
---CCATTGTTYB---
 G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C T G A C G T C G T A A C G T C G T A A G T C C G T A A T G C
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTCCCATTGTATACAC
---CCATTGTTC----
 G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C T G A C G T C G T A A C G T C G T A A G T C C G T A A T G C
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:9
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTCCCATTGTATACAC
------TTGTTTAC--
 G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C T G A C G T C G T A A C G T C G T A A G T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTCCCATTGTATACAC
-----ATTGTTTAN--
 G T A C A C G T A G T C A G T C G T A C C G T A A C G T A C G T A C T G A C G T C G T A A C G T C G T A A G T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T