Information for 5-GCYWAGWGAAACA (Motif 5)

A T C G A G T C A G C T C G A T C G T A A C T G C G A T C T A G C G T A C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T A C G T A G T C G C A T A G T C A C G T C G T A C T G A A C T G A T G C
p-value:1e-13
log p-value:-3.125e+01
Information Content per bp:1.891
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.7 +/- 23.3bp
Average Position of motif in Background38.4 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCYWAGWGAAACA--
TGCCAAAATAAACANN
 A C G T A T C G A G T C A G C T C G A T C G T A A C T G C G A T C T A G C G T A C G T A C G T A A G T C C G T A A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCYWAGWGAAACA-
----ACTGAAACCA
 A T C G A G T C A G C T C G A T C G T A A C T G C G A T C T A G C G T A C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCYWAGWGAAACA-
--WWATRTAAACAN
 A T C G A G T C A G C T C G A T C G T A A C T G C G A T C T A G C G T A C G T A C G T A A G T C C G T A A C G T
A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCYWAGWGAAACA---
-CAAAAGTAAACAAAG
 A T C G A G T C A G C T C G A T C G T A A C T G C G A T C T A G C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCYWAGWGAAACA
----AAATAAACA
 A T C G A G T C A G C T C G A T C G T A A C T G C G A T C T A G C G T A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXF2/MA0030.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCYWAGWGAAACA--
-CAAACGTAAACAAT
 A T C G A G T C A G C T C G A T C G T A A C T G C G A T C T A G C G T A C G T A C G T A A G T C C G T A A C G T A C G T
A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCYWAGWGAAACA
-GAAAGTGAAAGT
 A T C G A G T C A G C T C G A T C G T A A C T G C G A T C T A G C G T A C G T A C G T A A G T C C G T A
A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCYWAGWGAAACA--
---TAAGTAAACAAA
 A T C G A G T C A G C T C G A T C G T A A C T G C G A T C T A G C G T A C G T A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCYWAGWGAAACA--
---WWTRTAAACAVG
 A T C G A G T C A G C T C G A T C G T A A C T G C G A T C T A G C G T A C G T A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCYWAGWGAAACA
---AAAGTAAACA
 A T C G A G T C A G C T C G A T C G T A A C T G C G A T C T A G C G T A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A