Information for 10-TTAGGTCAGAGTG (Motif 16)

G A C T A G C T C G T A A C T G A C T G C G A T A G T C C G T A A C T G C T G A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G C T A G T C A C G T A C T G C G T A A G T C A G T C A C G T C T G A C T G A
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 24.4bp
Average Position of motif in Background45.2 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TTAGGTCAGAGTG----
--AGGTCACCCTGACCT
 G A C T A G C T C G T A A C T G A C T G C G A T A G T C C G T A A C T G C T G A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTAGGTCAGAGTG---
-NAGGTCACNNTGACC
 G A C T A G C T C G T A A C T G A C T G C G A T A G T C C G T A A C T G C T G A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTAGGTCAGAGTG
TRAGGTCA-----
 G A C T A G C T C G T A A C T G A C T G C G A T A G T C C G T A A C T G C T G A A C T G A C G T A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTAGGTCAGAGTG
--AGGTCA-----
 G A C T A G C T C G T A A C T G A C T G C G A T A G T C C G T A A C T G C T G A A C T G A C G T A C T G
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTAGGTCAGAGTG
AAYTAGGTCA-----
 A C G T A C G T G A C T A G C T C G T A A C T G A C T G C G A T A G T C C G T A A C T G C T G A A C T G A C G T A C T G
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTAGGTCAGAGTG-----
-CAGGTCACCGTGACCTT
 G A C T A G C T C G T A A C T G A C T G C G A T A G T C C G T A A C T G C T G A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

PPARG/MA0066.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTAGGTCAGAGTG-------
GTAGGTCACGGTGACCTACT
 G A C T A G C T C G T A A C T G A C T G C G A T A G T C C G T A A C T G C T G A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTAGGTCAGAGTG
TATAAGTAGGTCAA----
 A C G T A C G T A C G T A C G T A C G T G A C T A G C T C G T A A C T G A C T G C G A T A G T C C G T A A C T G C T G A A C T G A C G T A C T G
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTAGGTCAGAGTG
ATCAAGGTCA-----
 A C G T A C G T G A C T A G C T C G T A A C T G A C T G C G A T A G T C C G T A A C T G C T G A A C T G A C G T A C T G
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTAGGTCAGAGTG---
GTAGGTCACTGGGTCA
 G A C T A G C T C G T A A C T G A C T G C G A T A G T C C G T A A C T G C T G A A C T G A C G T A C T G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A