Information for 4-AGGCAAATATTTG (Motif 5)

C G T A C A T G C T A G G T A C G C T A C T G A G T C A A C G T T G C A C G A T C A G T C G A T A T C G
Reverse Opposite:
T A G C G C T A G T C A G C T A A C G T T G C A C A G T G A C T C G A T C A T G G A T C G T A C G C A T
p-value:1e-14
log p-value:-3.368e+01
Information Content per bp:1.648
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.59%
Number of Background Sequences with motif582.4
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets48.7 +/- 25.7bp
Average Position of motif in Background50.6 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:AGGCAAATATTTG----
---CTAATATTGCTAAA
 C G T A C A T G C T A G G T A C G C T A C T G A G T C A A C G T T G C A C G A T C A G T C G A T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:AGGCAAATATTTG----
---CTAATATTGCTAAA
 C G T A C A T G C T A G G T A C G C T A C T G A G T C A A C G T T G C A C G A T C A G T C G A T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGCAAATATTTG
ATATGCAAAT-----
 A C G T A C G T C G T A C A T G C T A G G T A C G C T A C T G A G T C A A C G T T G C A C G A T C A G T C G A T A T C G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAAATATTTG
TTATGCAAAT-----
 A C G T A C G T C G T A C A T G C T A G G T A C G C T A C T G A G T C A A C G T T G C A C G A T C A G T C G A T A T C G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAATATTTG
TATGTAAATAT---
 A C G T C G T A C A T G C T A G G T A C G C T A C T G A G T C A A C G T T G C A C G A T C A G T C G A T A T C G
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AGGCAAATATTTG
-----AATAATT-
 C G T A C A T G C T A G G T A C G C T A C T G A G T C A A C G T T G C A C G A T C A G T C G A T A T C G
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAAATATTTG
ATATGCAAATNNN--
 A C G T A C G T C G T A C A T G C T A G G T A C G C T A C T G A G T C A A C G T T G C A C G A T C A G T C G A T A T C G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGGCAAATATTTG
WAAGTAAAYA----
 A C G T C G T A C A T G C T A G G T A C G C T A C T G A G T C A A C G T T G C A C G A T C A G T C G A T A T C G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAATATTTG
TATGTAAATAT---
 A C G T C G T A C A T G C T A G G T A C G C T A C T G A G T C A A C G T T G C A C G A T C A G T C G A T A T C G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGCAAATATTTG
AAACAAACATTC-
 C G T A C A T G C T A G G T A C G C T A C T G A G T C A A C G T T G C A C G A T C A G T C G A T A T C G
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T