Information for 22-TGKRTRTGYAYMYATA (Motif 36)

A C G T A C T G A C G T C T A G A C G T C T A G A C G T C T A G A G C T C G T A A G C T G T C A A G C T C G T A C G A T C G T A
Reverse Opposite:
A C G T C G T A A C G T C T G A A C G T C T G A A C G T C T G A A G T C C G T A A G T C C G T A A G T C G T C A G T A C C G T A
p-value:1e-4
log p-value:-1.124e+01
Information Content per bp:1.821
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets66.3 +/- 13.3bp
Average Position of motif in Background55.2 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGKRTRTGYAYMYATA-
TACATGTGCACATAAAA
 A C G T A C T G A C G T C T A G A C G T C T A G A C G T C T A G A G C T C G T A A G C T G T C A A G C T C G T A C G A T C G T A A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGKRTRTGYAYMYATA
NNGTATGTGCACATNNN
 A C G T A C G T A C T G A C G T C T A G A C G T C T A G A C G T C T A G A G C T C G T A A G C T G T C A A G C T C G T A C G A T C G T A
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGKRTRTGYAYMYATA--
----TGTATATATATACC
 A C G T A C T G A C G T C T A G A C G T C T A G A C G T C T A G A G C T C G T A A G C T G T C A A G C T C G T A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGKRTRTGYAYMYATA
YATGCATATRCATRT---
 A C G T A C G T A C G T A C T G A C G T C T A G A C G T C T A G A C G T C T A G A G C T C G T A A G C T G T C A A G C T C G T A C G A T C G T A
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T A C G T A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGKRTRTGYAYMYATA-
---TTATGTACTAATAA
 A C G T A C T G A C G T C T A G A C G T C T A G A C G T C T A G A G C T C G T A A G C T G T C A A G C T C G T A C G A T C G T A A C G T
A C G T A C G T A C G T A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGKRTRTGYAYMYATA
----TATGTAAATAT-
 A C G T A C T G A C G T C T A G A C G T C T A G A C G T C T A G A G C T C G T A A G C T G T C A A G C T C G T A C G A T C G T A
A C G T A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGKRTRTGYAYMYATA
-GHATATKCAT-----
 A C G T A C T G A C G T C T A G A C G T C T A G A C G T C T A G A G C T C G T A A G C T G T C A A G C T C G T A C G A T C G T A
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGKRTRTGYAYMYATA
TNNATTATGCATANNTT
 A C G T A C G T A C T G A C G T C T A G A C G T C T A G A C G T C T A G A G C T C G T A A G C T G T C A A G C T C G T A C G A T C G T A
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGKRTRTGYAYMYATA----
---ANNNGGATATATCCNNN
 A C G T A C T G A C G T C T A G A C G T C T A G A C G T C T A G A G C T C G T A A G C T G T C A A G C T C G T A C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGKRTRTGYAYMYATA
CTCATGAATATTCAT-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G A C G T C T A G A C G T C T A G A G C T C G T A A G C T G T C A A G C T C G T A C G A T C G T A
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T