Information for 16-KAMRYRCMTGCTGGTA (Motif 23)

A C T G C G T A G T C A C T G A A G C T C T G A A G T C G T C A A C G T A C T G A G T C A C G T A C T G C T A G A C G T G T C A
Reverse Opposite:
A C G T C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C G T C T A G A G C T C T G A A G C T A C G T A C G T G T A C
p-value:1e-9
log p-value:-2.201e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 23.7bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.69
Offset:6
Orientation:forward strand
Alignment:KAMRYRCMTGCTGGTA-
------CATGCGGGTAC
 A C T G C G T A G T C A C T G A A G C T C T G A A G T C G T C A A C G T A C T G A G T C A C G T A C T G C T A G A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.67
Offset:6
Orientation:forward strand
Alignment:KAMRYRCMTGCTGGTA
------CCTGCTGAGH
 A C T G C G T A G T C A C T G A A G C T C T G A A G T C G T C A A C G T A C T G A G T C A C G T A C T G C T A G A C G T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:KAMRYRCMTGCTGGTA--
---TCNCCTGCTGNGNNN
 A C T G C G T A G T C A C T G A A G C T C T G A A G T C G T C A A C G T A C T G A G T C A C G T A C T G C T A G A C G T G T C A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.63
Offset:6
Orientation:forward strand
Alignment:KAMRYRCMTGCTGGTA
------TATGCGGGTA
 A C T G C G T A G T C A C T G A A G C T C T G A A G T C G T C A A C G T A C T G A G T C A C G T A C T G C T A G A C G T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:KAMRYRCMTGCTGGTA---
---NNNNATGCGGGTNNNN
 A C T G C G T A G T C A C T G A A G C T C T G A A G T C G T C A A C G T A C T G A G T C A C G T A C T G C T A G A C G T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:KAMRYRCMTGCTGGTA--
---TNTCCTGCTGTGNNG
 A C T G C G T A G T C A C T G A A G C T C T G A A G T C G T C A A C G T A C T G A G T C A C G T A C T G C T A G A C G T G T C A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:KAMRYRCMTGCTGGTA
---CCCCCTGCTGTG-
 A C T G C G T A G T C A C T G A A G C T C T G A A G T C G T C A A C G T A C T G A G T C A C G T A C T G C T A G A C G T G T C A
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:KAMRYRCMTGCTGGTA--
---NNTCCTGCTGTGNNN
 A C T G C G T A G T C A C T G A A G C T C T G A A G T C G T C A A C G T A C T G A G T C A C G T A C T G C T A G A C G T G T C A A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:KAMRYRCMTGCTGGTA
-----ACATCCTGNT-
 A C T G C G T A G T C A C T G A A G C T C T G A A G T C G T C A A C G T A C T G A G T C A C G T A C T G C T A G A C G T G T C A
A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KAMRYRCMTGCTGGTA
-GGCCYCCTGCTGDGH
 A C T G C G T A G T C A C T G A A G C T C T G A A G T C G T C A A C G T A C T G A G T C A C G T A C T G C T A G A C G T G T C A
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C