Information for 11-CTCCTACGTG (Motif 36)

A G T C A C G T A G T C G T A C A C G T C T G A A G T C A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C T G A G C T G T C A C A T G C T A G C G T A A C T G
p-value:1e-6
log p-value:-1.455e+01
Information Content per bp:1.878
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif42.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets57.0 +/- 25.8bp
Average Position of motif in Background48.1 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CTCCTACGTG-
---GGACGTGC
 A G T C A C G T A G T C G T A C A C G T C T G A A G T C A C T G A C G T A C T G A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CTCCTACGTG-
---RTACGTGC
 A G T C A C G T A G T C G T A C A C G T C T G A A G T C A C T G A C G T A C T G A C G T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CTCCTACGTG--
----TACGTGCV
 A G T C A C G T A G T C G T A C A C G T C T G A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTCCTACGTG-
-GGGTACGTGC
 A G T C A C G T A G T C G T A C A C G T C T G A A G T C A C T G A C G T A C T G A C G T
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTCCTACGTG
----TGCGTG
 A G T C A C G T A G T C G T A C A C G T C T G A A G T C A C T G A C G T A C T G
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

Arnt/MA0004.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTCCTACGTG
----CACGTG
 A G T C A C G T A G T C G T A C A C G T C T G A A G T C A C T G A C G T A C T G
A C G T A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTCCTACGTG---
---TTGCGTGCVA
 A G T C A C G T A G T C G T A C A C G T C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTCCTACGTG
--NCCACGTG
 A G T C A C G T A G T C G T A C A C G T C T G A A G T C A C T G A C G T A C T G
A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTCCTACGTG-
---ACACGTGC
 A G T C A C G T A G T C G T A C A C G T C T G A A G T C A C T G A C G T A C T G A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTCCTACGTG---
---CCACGTGGNN
 A G T C A C G T A G T C G T A C A C G T C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C