Information for 17-WCCATCWTTRAAC (Motif 26)

C G A T A T G C A G T C C G T A A C G T G T A C C G A T C G A T A C G T C T G A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G C T G T C A C G T A C G T A C A T G C G T A A C G T A C T G A T C G C G T A
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.823
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.8 +/- 21.1bp
Average Position of motif in Background56.8 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-WCCATCWTTRAAC-
TATCATAATTAAGGA
 A C G T C G A T A T G C A G T C C G T A A C G T G T A C C G A T C G A T A C G T C T G A C G T A C G T A A G T C A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---WCCATCWTTRAAC
GCNGCCATCTTG----
 A C G T A C G T A C G T C G A T A T G C A G T C C G T A A C G T G T A C C G A T C G A T A C G T C T G A C G T A C G T A A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---WCCATCWTTRAAC-
TCACCCATCAATAAACA
 A C G T A C G T A C G T C G A T A T G C A G T C C G T A A C G T G T A C C G A T C G A T A C G T C T G A C G T A C G T A A G T C A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

POU4F1/MA0790.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-WCCATCWTTRAAC
ATGAATAATTAATG
 A C G T C G A T A T G C A G T C C G T A A C G T G T A C C G A T C G A T A C G T C T G A C G T A C G T A A G T C
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

POU4F3/MA0791.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-WCCATCWTTRAAC--
ATGCATAATTAATGAG
 A C G T C G A T A T G C A G T C C G T A A C G T G T A C C G A T C G A T A C G T C T G A C G T A C G T A A G T C A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:WCCATCWTTRAAC-
-----ATTTGAATT
 C G A T A T G C A G T C C G T A A C G T G T A C C G A T C G A T A C G T C T G A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0005.1_Bbx_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:WCCATCWTTRAAC--
NANTTCATTGAATTA
 C G A T A T G C A G T C C G T A A C G T G T A C C G A T C G A T A C G T C T G A C G T A C G T A A G T C A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-WCCATCWTTRAAC
ATGCATAATTCA--
 A C G T C G A T A T G C A G T C C G T A A C G T G T A C C G A T C G A T A C G T C T G A C G T A C G T A A G T C
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:WCCATCWTTRAAC
-TCATCAATCA--
 C G A T A T G C A G T C C G T A A C G T G T A C C G A T C G A T A C G T C T G A C G T A C G T A A G T C
A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:WCCATCWTTRAAC---
----WWTRTAAACAVG
 C G A T A T G C A G T C C G T A A C G T G T A C C G A T C G A T A C G T C T G A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G