Information for 9-TGAATTVAGTGTGTGT (Motif 8)

C G A T A C T G C G T A C T G A A C G T A G C T T A C G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G C T
Reverse Opposite:
C T G A G T A C C G T A G T A C C G T A A G T C C G T A A G T C A C G T A G T C C T G A G T C A A G C T G C A T A G T C C G T A
p-value:1e-13
log p-value:-3.147e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 18.5bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:TGAATTVAGTGTGTGT----
----NNGCGTGTGTGCNGCN
 C G A T A C T G C G T A C T G A A C G T A G C T T A C G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGAATTVAGTGTGTGT
----TTRAGTGSYK--
 C G A T A C T G C G T A C T G A A C G T A G C T T A C G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G C T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGAATTVAGTGTGTGT
----TTAAGTGCTT--
 C G A T A C T G C G T A C T G A A C G T A G C T T A C G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G C T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGAATTVAGTGTGTGT
----TTGAGTGSTT--
 C G A T A C T G C G T A C T G A A C G T A G C T T A C G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G C T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGAATTVAGTGTGTGT
----TTAAGTGGN---
 C G A T A C T G C G T A C T G A A C G T A G C T T A C G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G C T
A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGAATTVAGTGTGTGT
----TTAAGTGGT---
 C G A T A C T G C G T A C T G A A C G T A G C T T A C G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G C T
A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGAATTVAGTGTGTGT
----TTAAGTGC----
 C G A T A C T G C G T A C T G A A C G T A G C T T A C G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G C T
A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGAATTVAGTGTGTGT-------
-GTGCTAATTGTGTGTGTACGCT
 C G A T A C T G C G T A C T G A A C G T A G C T T A C G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGAATTVAGTGTGTGT----
----NNNNTTGTGTGCTTNN
 C G A T A C T G C G T A C T G A A C G T A G C T T A C G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGAATTVAGTGTGTGT
---BTBRAGTGSN---
 C G A T A C T G C G T A C T G A A C G T A G C T T A C G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G C T
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T