Information for 4-MKKRGTTKRSCTTGGY (Motif 3)

T G C A A C G T A C G T C T A G A C T G A C G T A C G T C A G T C T A G A T C G G T A C A C G T A C G T A C T G A C T G A G T C
Reverse Opposite:
C T A G A G T C A G T C C G T A C G T A A C T G A T G C A G T C G T C A C G T A C G T A A G T C G A T C G T C A G T C A A C G T
p-value:1e-15
log p-value:-3.504e+01
Information Content per bp:1.793
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.2 +/- 26.6bp
Average Position of motif in Background51.5 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:MKKRGTTKRSCTTGGY-
-NNTGTTTATTTTGGCA
 T G C A A C G T A C G T C T A G A C T G A C G T A C G T C A G T C T A G A T C G G T A C A C G T A C G T A C T G A C T G A G T C A C G T
A C G T C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:MKKRGTTKRSCTTGGY
------TGACCTTGAV
 T G C A A C G T A C G T C T A G A C T G A C G T A C G T C A G T C T A G A T C G G T A C A C G T A C G T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:MKKRGTTKRSCTTGGY
----BNTGDCCTTG--
 T G C A A C G T A C G T C T A G A C T G A C G T A C G T C A G T C T A G A T C G G T A C A C G T A C G T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:MKKRGTTKRSCTTGGY
------TGACCTTGAN
 T G C A A C G T A C G T C T A G A C T G A C G T A C G T C A G T C T A G A T C G G T A C A C G T A C G T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.59
Offset:11
Orientation:forward strand
Alignment:MKKRGTTKRSCTTGGY-
-----------TTGGCA
 T G C A A C G T A C G T C T A G A C T G A C G T A C G T C A G T C T A G A T C G G T A C A C G T A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:MKKRGTTKRSCTTGGY
-----NTGACCTTGA-
 T G C A A C G T A C G T C T A G A C T G A C G T A C G T C A G T C T A G A T C G G T A C A C G T A C G T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:MKKRGTTKRSCTTGGY--
-NNNNATGACCTTGANTN
 T G C A A C G T A C G T C T A G A C T G A C G T A C G T C A G T C T A G A T C G G T A C A C G T A C G T A C T G A C T G A G T C A C G T A C G T
A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:MKKRGTTKRSCTTGGY
-----CTGACCTTTG-
 T G C A A C G T A C G T C T A G A C T G A C G T A C G T C A G T C T A G A T C G G T A C A C G T A C G T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:MKKRGTTKRSCTTGGY
-----ATGACCTTGA-
 T G C A A C G T A C G T C T A G A C T G A C G T A C G T C A G T C T A G A T C G G T A C A C G T A C G T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:MKKRGTTKRSCTTGGY---
----GCTGACCTTGAACTN
 T G C A A C G T A C G T C T A G A C T G A C G T A C G T C A G T C T A G A T C G G T A C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T