Information for 21-GGCAVGYCYCACA (Motif 29)

C A T G C A T G A T G C C G T A T A G C T C A G A G T C A G T C G A T C A G T C C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G A C G T A C T G C T A G A C T G T C A G A G T C A C T G G C A T A T C G G T A C G T A C
p-value:1e-7
log p-value:-1.818e+01
Information Content per bp:1.717
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif50.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets43.6 +/- 29.6bp
Average Position of motif in Background43.8 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGCAVGYCYCACA-----
--AGCGGCACACACGCAA
C A T G C A T G A T G C C G T A T A G C T C A G A G T C A G T C G A T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCAVGYCYCACA---
----NWAACCACADNN
C A T G C A T G A T G C C G T A T A G C T C A G A G T C A G T C G A T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGCAVGYCYCACA-----
--CGAAGCACACAAAATA
C A T G C A T G A T G C C G T A T A G C T C A G A G T C A G T C G A T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCAVGYCYCACA
--TGGGGCCCAC-
C A T G C A T G A T G C C G T A T A G C T C A G A G T C A G T C G A T C A G T C C G T A A G T C C G T A
A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGCAVGYCYCACA-----
--NNAGTCCCACTCNNNN
C A T G C A T G A T G C C G T A T A G C T C A G A G T C A G T C G A T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

HES7/MA0822.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCAVGYCYCACA
TGGCACGTGCCA--
A C G T C A T G C A T G A T G C C G T A T A G C T C A G A G T C A G T C G A T C A G T C C G T A A G T C C G T A
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGCAVGYCYCACA--
---YCCGCCCACGCN
C A T G C A T G A T G C C G T A T A G C T C A G A G T C A G T C G A T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGCAVGYCYCACA--
-----GCCACACCCA
C A T G C A T G A T G C C G T A T A G C T C A G A G T C A G T C G A T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGCAVGYCYCACA--
-----GCCMCRCCCH
C A T G C A T G A T G C C G T A T A G C T C A G A G T C A G T C G A T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGCAVGYCYCACA---
----GGCCACACCCAN
C A T G C A T G A T G C C G T A T A G C T C A G A G T C A G T C G A T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G