Information for 20-GCMAWAMKWTCCA (Motif 28)

A C T G A G T C G T A C G T C A C G T A C G T A G T C A A C T G C G A T A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A C G T A G T A C A C G T A C G T G C A T A C G T C A G T A C T G A G T C
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.837
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.0 +/- 25.6bp
Average Position of motif in Background44.8 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCMAWAMKWTCCA--
-----ATTTTCCATT
 A C T G A G T C G T A C G T C A C G T A C G T A G T C A A C T G C G A T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCMAWAMKWTCCA--
-----ATTTTCCATT
 A C T G A G T C G T A C G T C A C G T A C G T A G T C A A C T G C G A T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCMAWAMKWTCCA--
-----ATTTTCCATT
 A C T G A G T C G T A C G T C A C G T A C G T A G T C A A C T G C G A T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCMAWAMKWTCCA---
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T A C T G A G T C G T A C G T C A C G T A C G T A G T C A A C T G C G A T A C G T A G T C A G T C C G T A A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GCMAWAMKWTCCA
------TTTTCCA
 A C T G A G T C G T A C G T C A C G T A C G T A G T C A A C T G C G A T A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCMAWAMKWTCCA--
-----ATTTTCCATT
 A C T G A G T C G T A C G T C A C G T A C G T A G T C A A C T G C G A T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCMAWAMKWTCCA
CAATTGCAAAAATAT---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C G T C A C G T A C G T A G T C A A C T G C G A T A C G T A G T C A G T C C G T A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.55
Offset:8
Orientation:forward strand
Alignment:GCMAWAMKWTCCA-
--------ATCCAC
 A C T G A G T C G T A C G T C A C G T A C G T A G T C A A C T G C G A T A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCMAWAMKWTCCA--
TGCCAAAATAAACANN
 A C G T A C T G A G T C G T A C G T C A C G T A C G T A G T C A A C T G C G A T A C G T A G T C A G T C C G T A A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCMAWAMKWTCCA--
-----GCATTCCAGN
 A C T G A G T C G T A C G T C A C G T A C G T A G T C A A C T G C G A T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G