Information for 7-AACATGTTCC (Motif 20)

C G T A C G T A G T A C T C G A A C G T A C T G G C A T A C G T A G T C G T A C
Reverse Opposite:
C A T G C T A G G T C A C G T A G T A C G T C A A G C T A C T G C G A T A C G T
p-value:1e-9
log p-value:-2.093e+01
Information Content per bp:1.832
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif152.7
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets43.2 +/- 22.7bp
Average Position of motif in Background44.3 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----AACATGTTCC--
ANTNNTACATGTANNTN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C T C G A A C G T A C T G G C A T A C G T A G T C G T A C A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----AACATGTTCC--
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C T C G A A C G T A C T G G C A T A C G T A G T C G T A C A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AACATGTTCC--
NNTATTACATGTANNNT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C T C G A A C G T A C T G G C A T A C G T A G T C G T A C A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AACATGTTCC--
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C T C G A A C G T A C T G G C A T A C G T A G T C G T A C A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AACATGTTCC--
ANTATTACATGTANNNN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C T C G A A C G T A C T G G C A T A C G T A G T C G T A C A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AACATGTTCC---
---CTGTTCCTGG
 C G T A C G T A G T A C T C G A A C G T A C T G G C A T A C G T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AACATGTTCC
GWAAYHTGABMC
 A C G T A C G T C G T A C G T A G T A C T C G A A C G T A C T G G C A T A C G T A G T C G T A C
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

TFCP2/MA0145.3/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AACATGTTCC
AAACCGGTTT-
 A C G T C G T A C G T A G T A C T C G A A C G T A C T G G C A T A C G T A G T C G T A C
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AACATGTTCC--
ANTTNTACATGTANTTN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C T C G A A C G T A C T G G C A T A C G T A G T C G T A C A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACATGTTCC--
CCACCTGTTGCAT
 A C G T C G T A C G T A G T A C T C G A A C G T A C T G G C A T A C G T A G T C G T A C A C G T A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T