Information for 7-GTGTACYTAAGAT (Motif 13)

C T A G A C G T C A T G A C G T C G T A A G T C G A T C A G C T C G T A C G T A A C T G C T G A C A G T
Reverse Opposite:
G C T A G A C T A G T C C G A T G A C T T C G A C T A G A C T G C G A T G T C A G T A C C G T A A G T C
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.691
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif55.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets42.0 +/- 20.3bp
Average Position of motif in Background45.0 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTGTACYTAAGAT
TGTTTACTTT----
 A C G T C T A G A C G T C A T G A C G T C G T A A G T C G A T C A G C T C G T A C G T A A C T G C T G A C A G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTGTACYTAAGAT
TGTTTACTTT----
 A C G T C T A G A C G T C A T G A C G T C G T A A G T C G A T C A G C T C G T A C G T A A C T G C T G A C A G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGTACYTAAGAT
CNTGTTTACATA----
 A C G T A C G T A C G T C T A G A C G T C A T G A C G T C G T A A G T C G A T C A G C T C G T A C G T A A C T G C T G A C A G T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GTGTACYTAAGAT
TCCATGTTTACTTTG---
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T C A T G A C G T C G T A A G T C G A T C A G C T C G T A C G T A A C T G C T G A C A G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTGTACYTAAGAT
TGTTTACTTAGG--
 A C G T C T A G A C G T C A T G A C G T C G T A A G T C G A T C A G C T C G T A C G T A A C T G C T G A C A G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGTACYTAAGAT
TRTTTACTTW----
 A C G T C T A G A C G T C A T G A C G T C G T A A G T C G A T C A G C T C G T A C G T A A C T G C T G A C A G T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GTGTACYTAAGAT
TACATGTGCACATAAAA-
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T C A T G A C G T C G T A A G T C G A T C A G C T C G T A C G T A A C T G C T G A C A G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T

Gmeb1/MA0615.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGTACYTAAGAT--
GAGTGTACGTAAGATGG
 A C G T A C G T C T A G A C G T C A T G A C G T C G T A A G T C G A T C A G C T C G T A C G T A A C T G C T G A C A G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGTACYTAAGAT--
GAGTGTACGTAAGATGG
 A C G T A C G T C T A G A C G T C A T G A C G T C G T A A G T C G A T C A G C T C G T A C G T A A C T G C T G A C A G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTGTACYTAAGAT
BSNTGTTTACWYWGN--
 A C G T A C G T A C G T A C G T C T A G A C G T C A T G A C G T C G T A A G T C G A T C A G C T C G T A C G T A A C T G C T G A C A G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T A C G T