Information for 1-NTGTTTACWTARN (Motif 1)

T G C A G C A T T C A G C G A T A C G T A C G T T C G A G A T C G C A T A G C T C G T A C T A G A G T C
Reverse Opposite:
T C A G G A T C G C A T T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T
p-value:1e-270
log p-value:-6.226e+02
Information Content per bp:1.568
Number of Target Sequences with motif441.0
Percentage of Target Sequences with motif59.92%
Number of Background Sequences with motif3926.3
Percentage of Background Sequences with motif8.47%
Average Position of motif in Targets50.0 +/- 22.4bp
Average Position of motif in Background49.7 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:NTGTTTACWTARN
-TGTTTACTTT--
 T G C A G C A T T C A G C G A T A C G T A C G T T C G A G A T C G C A T A G C T C G T A C T A G A G T C
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:NTGTTTACWTARN
-TGTTTACTTT--
 T G C A G C A T T C A G C G A T A C G T A C G T T C G A G A T C G C A T A G C T C G T A C T A G A G T C
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.97
Offset:-3
Orientation:forward strand
Alignment:---NTGTTTACWTARN
TCCATGTTTACTTTG-
 A C G T A C G T A C G T T G C A G C A T T C A G C G A T A C G T A C G T T C G A G A T C G C A T A G C T C G T A C T A G A G T C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.97
Offset:1
Orientation:forward strand
Alignment:NTGTTTACWTARN
-TGTTTACTTAGG
 T G C A G C A T T C A G C G A T A C G T A C G T T C G A G A T C G C A T A G C T C G T A C T A G A G T C
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--NTGTTTACWTARN
BSNTGTTTACWYWGN
 A C G T A C G T T G C A G C A T T C A G C G A T A C G T A C G T T C G A G A T C G C A T A G C T C G T A C T A G A G T C
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.97
Offset:1
Orientation:forward strand
Alignment:NTGTTTACWTARN
-TRTTTACTTW--
 T G C A G C A T T C A G C G A T A C G T A C G T T C G A G A T C G C A T A G C T C G T A C T A G A G T C
A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-NTGTTTACWTARN
CNTGTTTACATA--
 A C G T T G C A G C A T T C A G C G A T A C G T A C G T T C G A G A T C G C A T A G C T C G T A C T A G A G T C
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NTGTTTACWTARN
ATATTTACATA--
 T G C A G C A T T C A G C G A T A C G T A C G T T C G A G A T C G C A T A G C T C G T A C T A G A G T C
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-NTGTTTACWTARN
TTTGTTTACTTA--
 A C G T T G C A G C A T T C A G C G A T A C G T A C G T T C G A G A T C G C A T A G C T C G T A C T A G A G T C
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:NTGTTTACWTARN
-TGTTTAC-----
 T G C A G C A T T C A G C G A T A C G T A C G T T C G A G A T C G C A T A G C T C G T A C T A G A G T C
A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T