Information for 7-ATGACCTAAT (Motif 9)

C G T A C G A T A C T G C G T A A G T C A G T C A C G T C G T A G C T A A G C T
Reverse Opposite:
T C G A C G A T G A C T C G T A C T A G C T A G A C G T A G T C C G T A A C G T
p-value:1e-11
log p-value:-2.723e+01
Information Content per bp:1.849
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif59.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets42.5 +/- 33.0bp
Average Position of motif in Background47.8 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:ATGACCTAAT-
-TGACCTARTT
 C G T A C G A T A C T G C G T A A G T C A G T C A C G T C G T A G C T A A G C T A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:ATGACCTAAT
-TGACCTYA-
 C G T A C G A T A C T G C G T A A G T C A G T C A C G T C G T A G C T A A G C T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:ATGACCTAAT
-TGACCT---
 C G T A C G A T A C T G C G T A A G T C A G T C A C G T C G T A G C T A A G C T
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:ATGACCTAAT----
TTGACCTANTTATN
 C G T A C G A T A C T G C G T A A G T C A G T C A C G T C G T A G C T A A G C T A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ATGACCTAAT-
-TGACCTTGAT
 C G T A C G A T A C T G C G T A A G T C A G T C A C G T C G T A G C T A A G C T A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ATGACCTAAT
CATGAC-----
 A C G T C G T A C G A T A C T G C G T A A G T C A G T C A C G T C G T A G C T A A G C T
T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T

Crem/MA0609.1/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ATGACCTAAT
TATGACGTAA-
 A C G T C G T A C G A T A C T G C G T A A G T C A G T C A C G T C G T A G C T A A G C T
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A A C G T

Creb5/MA0840.1/Jaspar

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATGACCTAAT-
AATGACGTCACC
 A C G T C G T A C G A T A C T G C G T A A G T C A G T C A C G T C G T A G C T A A G C T A C G T
T C G A T C G A G A C T C A T G C G T A A G T C C T A G G C A T G T A C C G T A A G T C G A T C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATGACCTAAT----
NATGACATCATCNNN
 A C G T C G T A C G A T A C T G C G T A A G T C A G T C A C G T C G T A G C T A A G C T A C G T A C G T A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

ATF7/MA0834.1/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ATGACCTAAT--
CGATGACGTCATCG
 A C G T A C G T C G T A C G A T A C T G C G T A A G T C A G T C A C G T C G T A G C T A A G C T A C G T A C G T
A G T C C T A G T C G A C A G T C A T G C T G A A G T C T C A G C A G T T G A C C T G A A G C T G T A C T C A G