Information for 16-CCTGCTCRTCCWS (Motif 20)

A G T C A G T C C G A T A C T G A G T C A C G T A G T C C T G A A C G T A G T C A G T C C G A T A T C G
Reverse Opposite:
T A G C G C A T A C T G A C T G C G T A A G C T A C T G C G T A A C T G A G T C C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.213e+01
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 18.5bp
Average Position of motif in Background87.1 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCTCRTCCWS
TGCCTGCGYCMCCTT
 A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A G T C C T G A A C G T A G T C A G T C C G A T A T C G
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCTGCTCRTCCWS
--TKCTGTTCCA-
 A G T C A G T C C G A T A C T G A G T C A C G T A G T C C T G A A C G T A G T C A G T C C G A T A T C G
A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCTCRTCCWS
SNGCACCTGCHS------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A G T C C T G A A C G T A G T C A G T C C G A T A T C G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTGCTCRTCCWS
CCTGCTGAGH---
 A G T C A G T C C G A T A C T G A G T C A C G T A G T C C T G A A C G T A G T C A G T C C G A T A T C G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCTCRTCCWS--
GNNAGCTAATCCCCCN
 A C G T A G T C A G T C C G A T A C T G A G T C A C G T A G T C C T G A A C G T A G T C A G T C C G A T A T C G A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCTGCTCRTCCWS
---GCTCGGSCTC
 A G T C A G T C C G A T A C T G A G T C A C G T A G T C C T G A A C G T A G T C A G T C C G A T A T C G
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCRTCCWS
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A G T C C T G A A C G T A G T C A G T C C G A T A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTGCTCRTCCWS
---GCTAATCC--
 A G T C A G T C C G A T A C T G A G T C A C G T A G T C C T G A A C G T A G T C A G T C C G A T A T C G
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCTCRTCCWS
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A G T C C T G A A C G T A G T C A G T C C G A T A T C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCRTCCWS
NCACCTGTN-------
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A G T C C T G A A C G T A G T C A G T C C G A T A T C G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T