Information for 8-ARTGAAACACAGGGAC (Motif 13)

C G T A T C A G C G A T A C T G C G T A T G C A G C T A A G T C C G T A G A T C G C T A C T A G A C T G T C A G C G T A A G T C
Reverse Opposite:
A C T G C G A T A G T C G T A C A G T C C A G T C A T G C G A T C T A G C A G T A C G T A C G T G T A C C G T A A G T C G A C T
p-value:1e-10
log p-value:-2.416e+01
Information Content per bp:1.704
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets36.5 +/- 16.0bp
Average Position of motif in Background58.7 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ARTGAAACACAGGGAC
---AAAACAAAGG---
 C G T A T C A G C G A T A C T G C G T A T G C A G C T A A G T C C G T A G A T C G C T A C T A G A C T G T C A G C G T A A G T C
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ARTGAAACACAGGGAC
-----AACAAAGG---
 C G T A T C A G C G A T A C T G C G T A T G C A G C T A A G T C C G T A G A T C G C T A C T A G A C T G T C A G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ARTGAAACACAGGGAC
-TWGHWACAWTGTWDC
 C G T A T C A G C G A T A C T G C G T A T G C A G C T A A G T C C G T A G A T C G C T A C T A G A C T G T C A G C G T A A G T C
A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ARTGAAACACAGGGAC
ACTGAAACCA------
 C G T A T C A G C G A T A C T G C G T A T G C A G C T A A G T C C G T A G A T C G C T A C T A G A C T G T C A G C G T A A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ARTGAAACACAGGGAC
-YDGHTACAWTGTADC
 C G T A T C A G C G A T A C T G C G T A T G C A G C T A A G T C C G T A G A T C G C T A C T A G A C T G T C A G C G T A A G T C
A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ARTGAAACACAGGGAC
AAACAGACAAAGGAAT
 C G T A T C A G C G A T A C T G C G T A T G C A G C T A A G T C C G T A G A T C G C T A C T A G A C T G T C A G C G T A A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ARTGAAACACAGGGAC
---AAAACAATGG---
 C G T A T C A G C G A T A C T G C G T A T G C A G C T A A G T C C G T A G A T C G C T A C T A G A C T G T C A G C G T A A G T C
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ARTGAAACACAGGGAC
CAAAAGTAAACAAAG----
 A C G T A C G T A C G T C G T A T C A G C G A T A C T G C G T A T G C A G C T A A G T C C G T A G A T C G C T A C T A G A C T G T C A G C G T A A G T C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ARTGAAACACAGGGAC
-CTCACACAATGGCGC
 C G T A T C A G C G A T A C T G C G T A T G C A G C T A A G T C C G T A G A T C G C T A C T A G A C T G T C A G C G T A A G T C
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ARTGAAACACAGGGAC
----GAACAATGGN--
 C G T A T C A G C G A T A C T G C G T A T G C A G C T A A G T C C G T A G A T C G C T A C T A G A C T G T C A G C G T A A G T C
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T