Information for 7-GCCTTGTGTAGGGAGT (Motif 11)

A T C G A T G C A G T C C G A T A C G T A C T G C G A T A C T G C G A T C T G A A C T G T C A G A T C G T C G A C T A G C A G T
Reverse Opposite:
G C T A G A T C A C G T A T G C A G T C A G T C G A C T C G T A T G A C C G T A T G A C C G T A C G T A C T A G T A C G A T G C
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.700
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 22.0bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCTTGTGTAGGGAGT
-CCTTTTATAGNC---
 A T C G A T G C A G T C C G A T A C G T A C T G C G A T A C T G C G A T C T G A A C T G T C A G A T C G T C G A C T A G C A G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCTTGTGTAGGGAGT
-CTTTGT---------
 A T C G A T G C A G T C C G A T A C G T A C T G C G A T A C T G C G A T C T G A A C T G T C A G A T C G T C G A C T A G C A G T
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTGTGTAGGGAGT
NNNNNNCTTTTATAN-----
 A C G T A C G T A C G T A C G T A T C G A T G C A G T C C G A T A C G T A C T G C G A T A C T G C G A T C T G A A C T G T C A G A T C G T C G A C T A G C A G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCCTTGTGTAGGGAGT
-CCATATATGG-----
 A T C G A T G C A G T C C G A T A C G T A C T G C G A T A C T G C G A T C T G A A C T G T C A G A T C G T C G A C T A G C A G T
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTGTGTAGGGAGT
NNNNNNCTTTTATAN-----
 A C G T A C G T A C G T A C G T A T C G A T G C A G T C C G A T A C G T A C T G C G A T A C T G C G A T C T G A A C T G T C A G A T C G T C G A C T A G C A G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCTTGTGTAGGGAGT
GCTATTTATAGC----
 A T C G A T G C A G T C C G A T A C G T A C T G C G A T A C T G C G A T C T G A A C T G T C A G A T C G T C G A C T A G C A G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCTTGTGTAGGGAGT
CCWTTGTYYB------
 A T C G A T G C A G T C C G A T A C G T A C T G C G A T A C T G C G A T C T G A A C T G T C A G A T C G T C G A C T A G C A G T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCCTTGTGTAGGGAGT
AGGVNCCTTTGT---------
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C A G T C C G A T A C G T A C T G C G A T A C T G C G A T C T G A A C T G T C A G A T C G T C G A C T A G C A G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTGTGTAGGGAGT
ANTCCTTTGTCTNNNN---
 A C G T A C G T A C G T A T C G A T G C A G T C C G A T A C G T A C T G C G A T A C T G C G A T C T G A A C T G T C A G A T C G T C G A C T A G C A G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTGTGTAGGGAGT
NNNCCATTGTGTNAN----
 A C G T A C G T A C G T A T C G A T G C A G T C C G A T A C G T A C T G C G A T A C T G C G A T C T G A A C T G T C A G A T C G T C G A C T A G C A G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T