Information for 12-GCCCAGGCAGGGC (Motif 9)

A T C G A G T C G T A C G T A C C G T A C T A G A C T G A G T C C G T A A C T G C T A G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C A G T C C G A T A C T G A G T C A G T C A C G T A C T G C A T G C T A G T A G C
p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.800
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif36.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets30.6 +/- 26.5bp
Average Position of motif in Background49.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GCCCAGGCAGGGC-
----WDNCTGGGCA
 A T C G A G T C G T A C G T A C C G T A C T A G A C T G A G T C C G T A A C T G C T A G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGGCAGGGC
GGCCYCCTGCTGDGH
 A C G T A C G T A T C G A G T C G T A C G T A C C G T A C T A G A C T G A G T C C G T A A C T G C T A G A C T G G T A C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCCAGGCAGGGC--
TCNCCTGCTGNGNNN
 A T C G A G T C G T A C G T A C C G T A C T A G A C T G A G T C C G T A A C T G C T A G A C T G G T A C A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCCCAGGCAGGGC
---CCTGCTGAGH
 A T C G A G T C G T A C G T A C C G T A C T A G A C T G A G T C C G T A A C T G C T A G A C T G G T A C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGGCAGGGC
ACGCCCACGCA----
 A C G T A C G T A T C G A G T C G T A C G T A C C G T A C T A G A C T G A G T C C G T A A C T G C T A G A C T G G T A C
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCCCAGGCAGGGC---------
--YCAGGCWCAGTACCAGGCTC
 A T C G A G T C G T A C G T A C C G T A C T A G A C T G A G T C C G T A A C T G C T A G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCCAGGCAGGGC--
NNTCCTGCTGTGNNN
 A T C G A G T C G T A C G T A C C G T A C T A G A C T G A G T C C G T A A C T G C T A G A C T G G T A C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCCCAGGCAGGGC----
---CAGGCCNNGGCCNN
 A T C G A G T C G T A C G T A C C G T A C T A G A C T G A G T C C G T A A C T G C T A G A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCCAGGCAGGGC
ATGCCCGGGCATGT-
 A C G T A C G T A T C G A G T C G T A C G T A C C G T A C T A G A C T G A G T C C G T A A C T G C T A G A C T G G T A C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGGCAGGGC
CGCCTCAGGCA----
 A C G T A C G T A T C G A G T C G T A C G T A C C G T A C T A G A C T G A G T C C G T A A C T G C T A G A C T G G T A C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T