Information for 9-CAGCTTCTCACTC (Motif 5)

A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A G T C C G T A A T G C A C G T A T G C
Reverse Opposite:
A T C G C G T A A T C G C G A T A C T G C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C T G
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.8 +/- 4.7bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGCTTCTCACTC
--GCTTCC-----
 A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A G T C C G T A A T G C A C G T A T G C
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGCTTCTCACTC
AGCAGCTGCT-----
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A G T C C G T A A T G C A C G T A T G C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTTCTCACTC
CTCAGCAGCTGCTACTG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A G T C C G T A A T G C A C G T A T G C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGCTTCTCACTC
NCAGCTGCTG----
 A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A G T C C G T A A T G C A C G T A T G C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCTTCTCACTC
AGCAGCTGCTNN---
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A G T C C G T A A T G C A C G T A T G C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCTTCTCACTC
CGCAGCTGCG-----
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A G T C C G T A A T G C A C G T A T G C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGCTTCTCACTC
CAGCTGTT-----
 A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A G T C C G T A A T G C A C G T A T G C
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTTCTCACTC
ACAGCTGTTV----
 A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A G T C C G T A A T G C A C G T A T G C
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTTCTCACTC
NNGCAGCTGTC-----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A G T C C G T A A T G C A C G T A T G C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTTCTCACTC
NNGCAGCTGTT-----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A G T C A C G T A G T C C G T A A T G C A C G T A T G C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T