Information for 1-SNTGTTTACWYWNNNN (Motif 1)

A T G C G C A T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A G T C G A T G A C T C T G A
Reverse Opposite:
G A C T C T G A G C T A G T C A G C A T T C G A C G A T C T A G G A C T G T C A G T C A C T G A A G T C C G T A C G T A T A C G
p-value:1e-228
log p-value:-5.258e+02
Information Content per bp:1.547
Number of Target Sequences with motif357.0
Percentage of Target Sequences with motif47.35%
Number of Background Sequences with motif2649.3
Percentage of Background Sequences with motif5.74%
Average Position of motif in Targets53.2 +/- 18.5bp
Average Position of motif in Background50.5 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1/MA0148.3/Jaspar

Match Rank:1
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--SNTGTTTACWYWNNNN
TCCATGTTTACTTTG---
 A C G T A C G T A T G C G C A T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A G T C G A T G A C T C T G A
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:SNTGTTTACWYWNNNN
CNTGTTTACATA----
 A T G C G C A T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A G T C G A T G A C T C T G A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-SNTGTTTACWYWNNNN
BSNTGTTTACWYWGN--
 A C G T A T G C G C A T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A G T C G A T G A C T C T G A
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:SNTGTTTACWYWNNNN
--TGTTTACTTT----
 A T G C G C A T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A G T C G A T G A C T C T G A
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:SNTGTTTACWYWNNNN
--TGTTTACTTT----
 A T G C G C A T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A G T C G A T G A C T C T G A
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.96
Offset:2
Orientation:forward strand
Alignment:SNTGTTTACWYWNNNN
--TGTTTACTTAGG--
 A T G C G C A T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A G T C G A T G A C T C T G A
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.94
Offset:2
Orientation:forward strand
Alignment:SNTGTTTACWYWNNNN
--TRTTTACTTW----
 A T G C G C A T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A G T C G A T G A C T C T G A
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:8
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-SNTGTTTACWYWNNNN
SCHTGTTTACAT-----
 A C G T A T G C G C A T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A G T C G A T G A C T C T G A
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T A C G T A C G T A C G T A C G T A C G T

FOXO4/MA0848.1/Jaspar

Match Rank:9
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:SNTGTTTACWYWNNNN
--TGTTTAC-------
 A T G C G C A T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A G T C G A T G A C T C T G A
A C G T A C G T C G A T C T A G G A C T C A G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:SNTGTTTACWYWNNNN
--TGTTTAC-------
 A T G C G C A T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G C T A A G C T C G T A C A G T C G A T G A C T C T G A
A C G T A C G T A G C T C T A G G C A T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T