Information for 7-GTCAGCYCAAGGG (Motif 6)

A C T G A C G T A T G C C G T A C T A G A G T C A G T C A G T C C G T A G T C A C T A G A C T G A T C G
Reverse Opposite:
A T G C A G T C A G T C C A G T A C G T A C T G C T A G A C T G A G T C A C G T A T C G G T C A G T A C
p-value:1e-13
log p-value:-3.142e+01
Information Content per bp:1.816
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 24.5bp
Average Position of motif in Background50.3 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2/MA0596.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCAGCYCAAGGG
ATCACCCCAT---
 A C T G A C G T A T G C C G T A C T A G A G T C A G T C A G T C C G T A G T C A C T A G A C T G A T C G
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTCAGCYCAAGGG---
--CCGCCCAAGGGCAG
 A C T G A C G T A T G C C G T A C T A G A G T C A G T C A G T C C G T A G T C A C T A G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTCAGCYCAAGGG---
--NTGCCCANNGGTNA
 A C T G A C G T A T G C C G T A C T A G A G T C A G T C A G T C C G T A G T C A C T A G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GTCAGCYCAAGGG--
---AGGTCAAGGTCA
 A C T G A C G T A T G C C G T A C T A G A G T C A G T C A G T C C G T A G T C A C T A G A C T G A T C G A C G T A C G T
A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCAGCYCAAGGG
ATCACCCCAC---
 A C T G A C G T A T G C C G T A C T A G A G T C A G T C A G T C C G T A G T C A C T A G A C T G A T C G
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTCAGCYCAAGGG
--CAGCC------
 A C T G A C G T A T G C C G T A C T A G A G T C A G T C A G T C C G T A G T C A C T A G A C T G A T C G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTCAGCYCAAGGG--
---AGGTCAAGGTCA
 A C T G A C G T A T G C C G T A C T A G A G T C A G T C A G T C C G T A G T C A C T A G A C T G A T C G A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCAGCYCAAGGG
GTCAGCANNTN--
 A C T G A C G T A T G C C G T A C T A G A G T C A G T C A G T C C G T A G T C A C T A G A C T G A T C G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCAGCYCAAGGG
CNGTCACGCCAC---
 A C G T A C G T A C T G A C G T A T G C C G T A C T A G A G T C A G T C A G T C C G T A G T C A C T A G A C T G A T C G
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGCYCAAGGG
TGAGTCAGCA------
 A C G T A C G T A C G T A C T G A C G T A T G C C G T A C T A G A G T C A G T C A G T C C G T A G T C A C T A G A C T G A T C G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T