Information for 13-MTSAGWTATK (Motif 37)

G T C A A C G T T A G C C G T A A T C G C G T A A C G T C T G A A C G T A C G T
Reverse Opposite:
G T C A C G T A A G C T C G T A C G A T A T G C A C G T A T C G C G T A A C G T
p-value:1e-7
log p-value:-1.772e+01
Information Content per bp:1.789
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif213.0
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets47.5 +/- 32.0bp
Average Position of motif in Background47.1 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU4F1/MA0790.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-MTSAGWTATK---
CATTAATTATTCAT
 A C G T G T C A A C G T T A G C C G T A A T C G C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

POU4F3/MA0791.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---MTSAGWTATK---
CTCATTAATTATGCAT
 A C G T A C G T A C G T G T C A A C G T T A G C C G T A A T C G C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

NFE2/MA0841.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-MTSAGWTATK
GATGAGTCATN
 A C G T G T C A A C G T T A G C C G T A A T C G C G T A A C G T C T G A A C G T A C G T
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

JDP2/MA0655.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:MTSAGWTATK
ATGAGTCAT-
 G T C A A C G T T A G C C G T A A T C G C G T A A C G T C T G A A C G T A C G T
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--MTSAGWTATK-----
GACAGAGATATCAGTGT
 A C G T A C G T G T C A A C G T T A G C C G T A A T C G C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:MTSAGWTATK--
-TGATTTATGGC
 G T C A A C G T T A G C C G T A A T C G C G T A A C G T C T G A A C G T A C G T A C G T A C G T
A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:MTSAGWTATK--
--NACATATGGN
 G T C A A C G T T A G C C G T A A T C G C G T A A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:MTSAGWTATK---
-TGATTTATGGCC
 G T C A A C G T T A G C C G T A A T C G C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

NEUROG2/MA0669.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:MTSAGWTATK--
--AACATATGTC
 G T C A A C G T T A G C C G T A A T C G C G T A A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:MTSAGWTATK--
--AACATATGTT
 G T C A A C G T T A G C C G T A A T C G C G T A A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T