Information for 22-TCCAAACTGGATTATC (Motif 36)

A G C T A G T C A G T C C G T A C G T A C T G A T A G C A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T G T A C
Reverse Opposite:
A C T G C G T A C G A T C G T A C G T A A C G T A G T C A G T C C G T A A T C G A G C T C G A T C G A T A C T G C T A G C T G A
p-value:1e-7
log p-value:-1.834e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets71.5 +/- 21.7bp
Average Position of motif in Background40.1 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0126.1_Obox6/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCCAAACTGGATTATC-
--AAAAACGGATTATTG
 A G C T A G T C A G T C C G T A C G T A C T G A T A G C A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T G T A C A C G T
A C G T A C G T G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:TCCAAACTGGATTATC
--------GGATTAGC
 A G C T A G T C A G T C C G T A C G T A C T G A T A G C A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:TCCAAACTGGATTATC
-------GGGATTAA-
 A G C T A G T C A G T C C G T A C G T A C T G A T A G C A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCAAACTGGATTATC
--TTGCCCGGATTAGG
 A G C T A G T C A G T C C G T A C G T A C T G A T A G C A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T G T A C
A C G T A C G T C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:TCCAAACTGGATTATC
------NGGGATTA--
 A G C T A G T C A G T C C G T A C G T A C T G A T A G C A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TCCAAACTGGATTATC
-------GGGATTANN
 A G C T A G T C A G T C C G T A C G T A C T G A T A G C A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TCCAAACTGGATTATC
------VRGGATTARN
 A G C T A G T C A G T C C G T A C G T A C T G A T A G C A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TCCAAACTGGATTATC
-------NGGATTAN-
 A G C T A G T C A G T C C G T A C G T A C T G A T A G C A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCCAAACTGGATTATC----
----AGGGGGATTAGCTGCC
 A G C T A G T C A G T C C G T A C G T A C T G A T A G C A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCCAAACTGGATTATC--
--CGTTGGGGATTAGCCT
 A G C T A G T C A G T C C G T A C G T A C T G A T A G C A C G T A C T G A C T G C G T A C G A T A C G T C G T A A C G T G T A C A C G T A C G T
A C G T A C G T A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T