Information for 24-GAGTGAAATTTGG (Motif 34)

A C T G C G T A A C T G A C G T A T C G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C G T A C C G T A C G T A C G T A A C G T C G A T A C G T A T G C C G T A A G T C A C G T G T A C
p-value:1e-8
log p-value:-1.973e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 22.5bp
Average Position of motif in Background45.1 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAGTGAAATTTGG
TTGAATGAAATTCGA
 A C G T A C G T A C T G C G T A A C T G A C G T A T C G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGAAATTTGG
GAAAGTGAAAGT---
 A C G T A C G T A C T G C G T A A C T G A C G T A T C G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GAGTGAAATTTGG
GAAAAGGTGTGAAAATT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A T C G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAGTGAAATTTGG
AGAAAGTGAAAGTGA-
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T A T C G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAGTGAAATTTGG------
---TGGACTTTGNNCTNTG
 A C T G C G T A A C T G A C G T A T C G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAGTGAAATTTGG-----
---TGGACTTTGNNCTCN
 A C T G C G T A A C T G A C G T A T C G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGTGAAATTTGG
GGAAGTGAAAST---
 A C G T A C G T A C T G C G T A A C T G A C G T A T C G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGAAATTTGG--
NNNGTGACCTTTGNNN
 A C G T A C T G C G T A A C T G A C G T A T C G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGAAATTTGG--
NNATTGGACTTTNGNN
 A C G T A C T G C G T A A C T G A C G T A T C G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGTGAAATTTGG
AAGGTGTGAAAAT---
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T A T C G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C T G
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T