Information for 23-AGKCSCCTTGTTT (Motif 33)

C G T A A C T G A C T G A G T C T A C G A G T C A G T C C G A T C G A T C T A G A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G A T G C C T A G G T A C A G T C C G A T
p-value:1e-8
log p-value:-1.973e+01
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 29.5bp
Average Position of motif in Background63.0 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:AGKCSCCTTGTTT-
----CCATTGTTTT
 C G T A A C T G A C T G A G T C T A C G A G T C A G T C C G A T C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGKCSCCTTGTTT-
----CCATTGTTYB
 C G T A A C T G A C T G A G T C T A C G A G T C A G T C C G A T C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AGKCSCCTTGTTT--
-----NVWTGTTTAC
 C G T A A C T G A C T G A G T C T A C G A G T C A G T C C G A T C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGKCSCCTTGTTT-
----CCWTTGTYYB
 C G T A A C T G A C T G A G T C T A C G A G T C A G T C C G A T C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGKCSCCTTGTTT
AGGVNCCTTTGT--
 A C G T C G T A A C T G A C T G A G T C T A C G A G T C A G T C C G A T C G A T C T A G A C G T A C G T A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:6
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:AGKCSCCTTGTTT--
-------TTGTTTAC
 C G T A A C T G A C T G A G T C T A C G A G T C A G T C C G A T C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGKCSCCTTGTTT-
----CCTTTGTTTT
 C G T A A C T G A C T G A G T C T A C G A G T C A G T C C G A T C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGKCSCCTTGTTT
---NCCATTGTTC
 C G T A A C T G A C T G A G T C T A C G A G T C A G T C C G A T C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGKCSCCTTGTTT----
-----SCHTGTTTACAT
 C G T A A C T G A C T G A G T C T A C G A G T C A G T C C G A T C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGKCSCCTTGTTT
---NCCATTGTTY
 C G T A A C T G A C T G A G T C T A C G A G T C A G T C C G A T C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T