Information for 4-TGTTDRCARA (Motif 3)

C G A T A T C G G C A T A C G T C G A T T C G A A T G C C G T A T C A G C G T A
Reverse Opposite:
C G A T A G T C A C G T T A C G A G C T G C T A C G T A C G T A T A G C G C T A
p-value:1e-22
log p-value:-5.268e+01
Information Content per bp:1.618
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif14.77%
Number of Background Sequences with motif2337.6
Percentage of Background Sequences with motif5.03%
Average Position of motif in Targets46.6 +/- 27.4bp
Average Position of motif in Background49.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTTDRCARA
CNTGTTTACATA
 A C G T A C G T C G A T A T C G G C A T A C G T C G A T T C G A A T G C C G T A T C A G C G T A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTTDRCARA-----
NSTGTTTRCWCAGBNNN
 A C G T A C G T C G A T A T C G G C A T A C G T C G A T T C G A A T G C C G T A T C A G C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTTDRCARA--
--ATGCCAGACN
 C G A T A T C G G C A T A C G T C G A T T C G A A T G C C G T A T C A G C G T A A C G T A C G T
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTTDRCARA
-CTTGGCAA-
 C G A T A T C G G C A T A C G T C G A T T C G A A T G C C G T A T C A G C G T A
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTTDRCARA
CBTGTTTAYAWW
 A C G T A C G T C G A T A T C G G C A T A C G T C G A T T C G A A T G C C G T A T C A G C G T A
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGTTDRCARA--
BSNTGTTTACWYWGN
 A C G T A C G T A C G T C G A T A T C G G C A T A C G T C G A T T C G A A T G C C G T A T C A G C G T A A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGTTDRCARA
GGTGYTGACAGS
 A C G T A C G T C G A T A T C G G C A T A C G T C G A T T C G A A T G C C G T A T C A G C G T A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTTDRCARA
-RHTGWCAR-
 C G A T A T C G G C A T A C G T C G A T T C G A A T G C C G T A T C A G C G T A
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTTDRCARA
ATATTTACATA
 A C G T C G A T A T C G G C A T A C G T C G A T T C G A A T G C C G T A T C A G C G T A
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Foxa2/MA0047.2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTTDRCARA--
TGTTTACTTAGG
 C G A T A T C G G C A T A C G T C G A T T C G A A T G C C G T A T C A G C G T A A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G