Information for 19-ADAATGCAABTCAATG (Motif 25)

C G T A C G T A T C G A C T G A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A G T C C G T A C T G A C G A T A C T G
Reverse Opposite:
A G T C C G T A A G C T A C G T C T A G C G T A T G C A A G C T C G A T C T A G G T A C C G T A A G C T A G C T G C A T G C A T
p-value:1e-10
log p-value:-2.314e+01
Information Content per bp:1.787
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.3 +/- 21.5bp
Average Position of motif in Background40.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ADAATGCAABTCAATG---
---AATCAATTCAATAATT
 C G T A C G T A T C G A C T G A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A G T C C G T A C T G A C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ADAATGCAABTCAATG
TTGAATGAAATTCGA--
 A C G T C G T A C G T A T C G A C T G A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A G T C C G T A C T G A C G A T A C T G
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:ADAATGCAABTCAATG-----
------TAATTCAATGAAGTG
 C G T A C G T A T C G A C T G A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A G T C C G T A C T G A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ADAATGCAABTCAATG
--SCTGTCAVTCAV--
 C G T A C G T A T C G A C T G A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A G T C C G T A C T G A C G A T A C T G
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ADAATGCAABTCAATG
--WATGCAAATGAG--
 C G T A C G T A T C G A C T G A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A G T C C G T A C T G A C G A T A C T G
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ADAATGCAABTCAATG
--NCTGTCAATCAN--
 C G T A C G T A T C G A C T G A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A G T C C G T A C T G A C G A T A C T G
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ADAATGCAABTCAATG
AATATGCAAATTAG--
 C G T A C G T A T C G A C T G A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A G T C C G T A C T G A C G A T A C T G
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ADAATGCAABTCAATG----
NTNATGCAAYMNNHTGMAAY
 C G T A C G T A T C G A C T G A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A G T C C G T A C T G A C G A T A C T G A C G T A C G T A C G T A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ADAATGCAABTCAATG
--TATGCWAATBAV--
 C G T A C G T A T C G A C T G A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A G T C C G T A C T G A C G A T A C T G
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ADAATGCAABTCAATG
-ATATGCAAATNNN--
 C G T A C G T A T C G A C T G A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A G T C C G T A C T G A C G A T A C T G
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T