Information for 13-CAAGCCAAACATA (Motif 18)

A G T C C G T A C T G A A C T G G T A C A G T C C G T A C G T A C G T A A G T C G T C A C G A T C G T A
Reverse Opposite:
A C G T C G T A A C G T C T A G A C G T A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C T G
p-value:1e-11
log p-value:-2.727e+01
Information Content per bp:1.868
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 34.8bp
Average Position of motif in Background63.0 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CAAGCCAAACATA
TGCCAAAATAAACANN
 A C G T A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A C G T A C G T A A G T C G T C A C G A T C G T A
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAAGCCAAACATA
--TGCCAA-----
 A G T C C G T A C T G A A C T G G T A C A G T C C G T A C G T A C G T A A G T C G T C A C G A T C G T A
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAAGCCAAACATA
CGTGCCAAG----
 A G T C C G T A C T G A A C T G G T A C A G T C C G T A C G T A C G T A A G T C G T C A C G A T C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAAGCCAAACATA--
---GCTAAAAATAGC
 A G T C C G T A C T G A A C T G G T A C A G T C C G T A C G T A C G T A A G T C G T C A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAAGCCAAACATA---
-ATGCTAAAAATAGAA
 A G T C C G T A C T G A A C T G G T A C A G T C C G T A C G T A C G T A A G T C G T C A C G A T C G T A A C G T A C G T A C G T
A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAGCCAAACATA---
AACACCAAAACAAAGGA
 A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A C G T A C G T A A G T C G T C A C G A T C G T A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0032.1_IRC900814_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAAGCCAAACATA
ATTTACGACAAATAGC
 A C G T A C G T A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A C G T A C G T A A G T C G T C A C G A T C G T A
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAAGCCAAACATA--
---KCCAAAAATAGC
 A G T C C G T A C T G A A C T G G T A C A G T C C G T A C G T A C G T A A G T C G T C A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAAGCCAAACATA-
CAAAAGTAAACAAAG
 A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A C G T A C G T A A G T C G T C A C G A T C G T A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAAGCCAAACATA
ACTAGCCAATCA--
 A C G T A G T C C G T A C T G A A C T G G T A C A G T C C G T A C G T A C G T A A G T C G T C A C G A T C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T