Information for 11-CAAMRCAWTCARACAA (Motif 12)

A T G C C G T A C T G A T G C A C T A G T G A C C G T A C G A T A C G T A G T C C G T A T C G A C G T A A G T C C G T A G T C A
Reverse Opposite:
A C G T C G A T A C T G C G A T A G C T A C G T C T A G C G T A C G T A C G A T A C T G A G T C A C G T A G C T C G A T T A C G
p-value:1e-13
log p-value:-3.031e+01
Information Content per bp:1.714
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.5 +/- 29.5bp
Average Position of motif in Background51.0 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:CAAMRCAWTCARACAA
--------BCAGACWA
 A T G C C G T A C T G A T G C A C T A G T G A C C G T A C G A T A C G T A G T C C G T A T C G A C G T A A G T C C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAMRCAWTCARACAA-
GACCACATTCATACAAT
 A T G C C G T A C T G A T G C A C T A G T G A C C G T A C G A T A C G T A G T C C G T A T C G A C G T A A G T C C G T A G T C A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAAMRCAWTCARACAA-
-----CCATCAATCAAA
 A T G C C G T A C T G A T G C A C T A G T G A C C G T A C G A T A C G T A G T C C G T A T C G A C G T A A G T C C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAAMRCAWTCARACAA
---CGGTTTCAAA---
 A T G C C G T A C T G A T G C A C T A G T G A C C G T A C G A T A C G T A G T C C G T A T C G A C G T A A G T C C G T A G T C A
A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAAMRCAWTCARACAA
NWTAAYCYAATCAWN---
 A C G T A C G T A T G C C G T A C T G A T G C A C T A G T G A C C G T A C G A T A C G T A G T C C G T A T C G A C G T A A G T C C G T A G T C A
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAAMRCAWTCARACAA---
---GAAGATCAATCACTTA
 A T G C C G T A C T G A T G C A C T A G T G A C C G T A C G A T A C G T A G T C C G T A T C G A C G T A A G T C C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAAMRCAWTCARACAA
----CCAATCAA----
 A T G C C G T A C T G A T G C A C T A G T G A C C G T A C G A T A C G T A G T C C G T A T C G A C G T A A G T C C G T A G T C A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAAMRCAWTCARACAA---
---GAAGATCAATCACTAA
 A T G C C G T A C T G A T G C A C T A G T G A C C G T A C G A T A C G T A G T C C G T A T C G A C G T A A G T C C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CAAMRCAWTCARACAA
-----NATTCAAAT--
 A T G C C G T A C T G A T G C A C T A G T G A C C G T A C G A T A C G T A G T C C G T A T C G A C G T A A G T C C G T A G T C A
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAAMRCAWTCARACAA-
CGACCCAATCAACGGTG
 A T G C C G T A C T G A T G C A C T A G T G A C C G T A C G A T A C G T A G T C C G T A T C G A C G T A A G T C C G T A G T C A A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G